DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and AMSH2

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_172530.2 Gene:AMSH2 / 837603 AraportID:AT1G10600 Length:223 Species:Arabidopsis thaliana


Alignment Length:130 Identity:30/130 - (23%)
Similarity:52/130 - (40%) Gaps:25/130 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DNQVMGTLLGRNKEGHIEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVL---GW 94
            |.:..|||....:.|...:|. ..:|.:|.:.|.        ...:.|:.:|:..|||.|   ||
plant    70 DLETCGTLAAFLERGIFYVTT-LIIPKQESTSNS--------CQAMNEVEVFSIQNERELYPVGW 125

  Fly    95 FCTGKSVS--RSASLIHDYYVRECCEGQPLHLLV---DAALKNQRLSTRLYCAVEMGVPGGTKGL 154
            ..|..|..  .|:..:|.:|..:....:...::|   |        |::.|...::..|||.:.|
plant   126 IHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTD--------SSKSYGIFKLTDPGGMEVL 182

  Fly   155  154
            plant   183  182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 30/130 (23%)
AMSH2NP_172530.2 MPN_AMSH_like 46..223 CDD:163697 30/130 (23%)

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