DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and CSN6A

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_568839.1 Gene:CSN6A / 835727 AraportID:AT5G56280 Length:317 Species:Arabidopsis thaliana


Alignment Length:304 Identity:65/304 - (21%)
Similarity:123/304 - (40%) Gaps:41/304 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LKPLVFFQIIDAYDR-----RP--------KGDN----------QVMGTLLGRNKEGHIEITNCF 55
            |.|||...|.|.|.|     .|        .|.|          :|.|.::|..:...:||.|.|
plant    13 LHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVEIFNSF 77

  Fly    56 TVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYY--VRECCE 118
            .:.:...::.    ||.::..:..||....:|:..:|||:.||.....|...||...  :.|   
plant    78 ELLYDPSTQT----LDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIHKALMDINE--- 135

  Fly   119 GQPLHLLVDAALKNQR--LSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALRCIEKQSQ 181
             .|:::|::.|:.:.:  |...:| ..|:.|..|...|:|:.....|....::.:::..:.....
plant   136 -SPVYVLLNPAINHTQKDLPVTIY-ESELHVIDGIPQLIFAHTSYTIETVEAERISVDHVAHLKP 198

  Fly   182 QQASKQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDS 246
            ........:....|..:..|.:.:..|:.::.:.:..:....|..||.|.|.:.:.|..:|.::|
plant   199 SDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGDKSCDNSVLRQVSSLLRRLPAMES 263

  Fly   247 DKFRVMFNTNLRDMLMAITLSTMI----KTQLEISEKLSCMQDQ 286
            ::|:..|.....|.|: ||...||    ....|:.:|.:...|:
plant   264 ERFQDNFLMEYNDKLL-ITYLAMITNCSSNMNEMVDKFNTAYDR 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 63/296 (21%)
CSN6ANP_568839.1 MPN_CSN6 9..313 CDD:163694 65/304 (21%)

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