DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and CSN6B

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_567746.1 Gene:CSN6B / 828749 AraportID:AT4G26430 Length:317 Species:Arabidopsis thaliana


Alignment Length:304 Identity:64/304 - (21%)
Similarity:120/304 - (39%) Gaps:41/304 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LKPLVFFQIIDAYDR-----RP--------KGDN----------QVMGTLLGRNKEGHIEITNCF 55
            |.|||...|.|.:.|     .|        .|.|          :|.|.::|..:...:||.|.|
plant    13 LHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYGCVIGLQRGRTVEIFNSF 77

  Fly    56 TVPHKEHSENKRID-LDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYY--VRECC 117
                 |...:..:| ||.::..:..||....:|:..||||:.||...:.|...||...  :.|  
plant    78 -----ELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIHKALMDINE-- 135

  Fly   118 EGQPLHLLVDAALKNQR--LSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALRCIEKQS 180
              .|:::|::.|:.:.:  |...:| ..|..|..|....:|......|....::.:::..:....
plant   136 --SPVYVLLNPAINHAQKDLPVTIY-ESEFHVIDGIPQSIFVHTSYTIETVEAERISVDHVAHLK 197

  Fly   181 QQQASKQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLD 245
            .........:....|..:..|.:.:..|:.::.::|..:....|..:|.|.|.:.:.|.::|..:
plant   198 PSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIVAMQKGDKPCENSVLRQVSSLLRSLPAAE 262

  Fly   246 SDKFRVMFNTNLRDMLMAITLSTM---IKTQLEISEKLSCMQDQ 286
            |:||...|.....|.|:...|:.:   .....|:.:|.:...|:
plant   263 SEKFNENFLMEYNDKLLMSYLAMITNCTSNMNEVVDKFNTAYDK 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 62/296 (21%)
CSN6BNP_567746.1 MPN_CSN6 9..310 CDD:163694 64/304 (21%)

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