DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and BRCC36B

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_001078118.1 Gene:BRCC36B / 819866 AraportID:AT3G06820 Length:405 Species:Arabidopsis thaliana


Alignment Length:221 Identity:41/221 - (18%)
Similarity:84/221 - (38%) Gaps:59/221 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QVMGTLLG---RNKEGHIEITNCFTVPHKEHSENK--RIDLD----MAYASEVLELNMFAYPNER 90
            ::||.|||   .:|.|.......:....:..|:.:  |::.:    .|.:::...:.:......|
plant    27 EIMGLLLGDIEYSKNGESATAMIWGASPQPRSDRQKDRVETNPEQLAAASAQADRMTISTGRTTR 91

  Fly    91 VLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYCAVEMGVPGGTKGLM 155
            |:||:.:...::...|.:.   ||.    |.::.|:|:                     |..||:
plant    92 VIGWYHSHPHITVLPSHVD---VRT----QAMYQLLDS---------------------GFIGLI 128

  Fly   156 FSLVPLEISNENSDLVALRCIEKQSQQQASKQMERFVPELAQVVDATRDMQHRLDLVLRYINDVL 220
            ||.    .|.:.:.:..::.|..||    |......:|:...:|.|.:|.          :.|:.
plant   129 FSC----FSEDANKVGRIQVIAFQS----SDGKPNSIPKSMSLVLANKDS----------VIDIE 175

  Fly   221 ARKKKPDNVVGRSLYAALTAVPLLDS 246
            :.....|::..||    .::.|.||:
plant   176 SSSSSSDSIYQRS----SSSKPELDT 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 41/221 (19%)
BRCC36BNP_001078118.1 MPN_BRCC36 3..363 CDD:163699 41/221 (19%)

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