DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and psmd14

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_001077042.1 Gene:psmd14 / 799058 ZFINID:ZDB-GENE-070410-56 Length:310 Species:Danio rerio


Alignment Length:279 Identity:47/279 - (16%)
Similarity:100/279 - (35%) Gaps:66/279 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRNKEGH-IEITNCFTVPHKEHSENKRIDLDMAY 74
            :||:..|...:::.  ..|.....:|||.:||...:.: :.:.:.|.:|......:... :|..:
Zfish    30 QVYISSLALLKMLK--HGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA-VDPVF 91

  Fly    75 ASEVLELNMFAYPNERVLGWF-------C--TGKSVSRSASLIHDYYVRECCEGQPLHLLVDAAL 130
            .:::|::.......|.|:||:       |  :|..::...|.       |....:.:.::||.. 
Zfish    92 QAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSF-------EALSERAVAVVVDPI- 148

  Fly   131 KNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALRCIEKQSQQQASKQMERFVPEL 195
                          ..|.|......|.|:       |::::.|   ..:.:|..|.......|.:
Zfish   149 --------------QSVKGKVVIDAFRLI-------NANMMVL---GHEPRQTTSNLGHLNKPSI 189

  Fly   196 AQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFNTNLRDM 260
            ..::....  :|...:.:.|..:.|.:|.                  ||:..|...|....|:|.
Zfish   190 QALIHGLN--RHYYSITINYRKNELEQKM------------------LLNLHKKSWMEGLTLQDY 234

  Fly   261 LMAITLS-TMIKTQLEISE 278
            .....|: |::|..||:::
Zfish   235 SEHCKLNETIVKEMLELAK 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 47/278 (17%)
psmd14NP_001077042.1 MPN_RPN11_CSN5 25..286 CDD:163700 47/279 (17%)

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