DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and psmd7

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_956083.1 Gene:psmd7 / 327330 ZFINID:ZDB-GENE-030131-5541 Length:327 Species:Danio rerio


Alignment Length:272 Identity:64/272 - (23%)
Similarity:125/272 - (45%) Gaps:21/272 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVYLKPLVFFQIIDAYDRRPKGDNQ--VMGTLLGRNKEGHIEITNCFTVPHKEHSENKRI-DLDM 72
            :|.:.|||...::|.::|..|..:|  |:|.|||..::..::::|.|.||..|..::..: .||.
Zfish     8 RVVVHPLVLLSVVDHFNRIGKVGSQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDH 72

  Fly    73 AYASEVLELNMFAYPN--ERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRL 135
            .|...:  ..||...|  ||::||:.||..:.::...|:: .:::.|....| :::|...|:..|
Zfish    73 DYLENM--YGMFKKVNARERIVGWYHTGPKLHKNDIAINE-LMKQYCSNSVL-VIIDVKPKDLGL 133

  Fly   136 STRLYCAVEMGVPGGT-KGLMFSLVPLEISNENSDLVA----LRCIEKQSQQQASKQMERFVPEL 195
            .|..|.:||.....|| ....|..|..||..|.::.|.    ||.|:..:....|::       :
Zfish   134 PTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQR-------I 191

  Fly   196 AQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFNTNLRDM 260
            ...|...:.:..:|..:..|:..|...|...::.:...|......:|.::..:|...|.....|.
Zfish   192 TNQVHGLKGLNSKLLDIKSYLEKVATGKLPINHQIIYQLQDVFNLLPDVNLQEFVKAFYLKTNDQ 256

  Fly   261 LMAITLSTMIKT 272
            ::.:.|:::|::
Zfish   257 MLVVYLASLIRS 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 64/271 (24%)
psmd7NP_956083.1 MPN_RPN7_8 7..287 CDD:163693 64/272 (24%)

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