DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and Psmd14

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_001020860.1 Gene:Psmd14 / 311078 RGDID:1594532 Length:310 Species:Rattus norvegicus


Alignment Length:86 Identity:17/86 - (19%)
Similarity:40/86 - (46%) Gaps:4/86 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRNKEGH-IEITNCFTVPHKEHSENKRIDLDMAY 74
            :||:..|...:::.  ..|.....:|||.:||...:.: :.:.:.|.:|......:... :|..:
  Rat    30 QVYISSLALLKMLK--HGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA-VDPVF 91

  Fly    75 ASEVLELNMFAYPNERVLGWF 95
            .:::|::.......|.|:||:
  Rat    92 QAKMLDMLKQTGRPEMVVGWY 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 17/85 (20%)
Psmd14NP_001020860.1 MPN_RPN11_CSN5 21..286 CDD:163700 17/86 (20%)

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