DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and Eif3f

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_001264231.1 Gene:Eif3f / 293427 RGDID:1306112 Length:361 Species:Rattus norvegicus


Alignment Length:277 Identity:103/277 - (37%)
Similarity:162/277 - (58%) Gaps:22/277 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRNKEGHIEITNCFTVPHKEHSENKRIDLDMAYAS 76
            |.|.|::...|:|:|:||.:|..:|:|||||...:..:|:||||:|||.| ||:: :.:||.:|.
  Rat    96 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNE-SEDE-VAVDMEFAK 158

  Fly    77 EVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYC 141
            .:.||:....|||.:|||:.||..::..:.|||:||.||.  ..|:||.||..|:|.|:|.:.|.
  Rat   159 NMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREA--PNPIHLTVDTGLQNGRMSIKAYV 221

  Fly   142 AVEMGVPGGTKGLMFSLVPLEISNENSDLVALRCIEKQSQQQASKQMERFVP--------ELAQV 198
            :..|||||.|.|:||:.:.::.:..:::.:.:..|.|..          |.|        :|.||
  Rat   222 STLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTC----------FSPNRVIGLSSDLQQV 276

  Fly   199 VDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFNTNLRDMLMA 263
            ..|:..:|..|..||:|..|||:.|...||.|||.|.:.:..||.:..|.|..|.|:|:.|:||.
  Rat   277 GGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMV 341

  Fly   264 ITLSTMIKTQLEISEKL 280
            ..|:.:.::|:.::|||
  Rat   342 TYLANLTQSQIALNEKL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 101/275 (37%)
Eif3fNP_001264231.1 MPN_eIF3f 96..358 CDD:163695 101/275 (37%)

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