DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and Cops5

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_038743.1 Gene:Cops5 / 26754 MGIID:1349415 Length:334 Species:Mus musculus


Alignment Length:94 Identity:21/94 - (22%)
Similarity:40/94 - (42%) Gaps:12/94 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RPKGDNQVMGTLLGRNKEGHIEITNCFTVPHKEHSENKRIDLDMA---YASEVLELNMFAYPNER 90
            |..|:.:|||.:||:.....:.|.:.|.:| .|.:|. |::...|   |.:..:|........|.
Mouse    70 RSGGNLEVMGLMLGKVDGETMIIMDSFALP-VEGTET-RVNAQAAAYEYMAAYIENAKQVGRLEN 132

  Fly    91 VLGWF-------CTGKSVSRSASLIHDYY 112
            .:||:       |....:..|..:::..:
Mouse   133 AIGWYHSHPGYGCWLSGIDVSTQMLNQQF 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 21/94 (22%)
Cops5NP_038743.1 MPN_RPN11_CSN5 44..314 CDD:163700 21/94 (22%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 138..151 1/12 (8%)

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