DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and SPBC4C3.07

DIOPT Version :9

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_596298.1 Gene:SPBC4C3.07 / 2540868 PomBaseID:SPBC4C3.07 Length:302 Species:Schizosaccharomyces pombe


Alignment Length:295 Identity:79/295 - (26%)
Similarity:150/295 - (50%) Gaps:39/295 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VYLKPLVFFQIIDAYDRRPKGDNQVMGTLLG-RNKEG-HIEITNCFTVPHKEHSENKRIDLDMAY 74
            :.::|.|.|.|:|...|:.:.:.:|:||||| |:::| .|||.:||.|||.|.||  :::::|.|
pombe    23 IVIEPAVLFSILDHSTRKSENNQRVIGTLLGTRSEDGREIEIKSCFAVPHNESSE--QVEVEMEY 85

  Fly    75 ASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEG-QPL--------HLLVDAAL 130
            ...:..|::.|.|.|.|:||:.|...:...::||.:.|......| .||        ||.|:..:
pombe    86 HRAMYHLHLKANPREVVVGWYATSPDLDAFSALIQNLYASPAEPGTAPLGTYPHPCVHLTVNTDV 150

  Fly   131 KNQRLSTRLYCAVEMGVPGGTKGL----MFSLVPLEISNE---NSDLVALRCIEKQSQQQAS--- 185
            .:. |:.:.|.:..:|:   |:.|    .|...|..|.::   .|.|.|:...:....:.||   
pombe   151 SSP-LAIKTYVSSPVGI---TERLADSCAFVPTPFTIRDDEAVRSGLKAVAAPKNDPSRLASLFT 211

  Fly   186 --KQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDK 248
              :|:.|...||..:::...|          |:.:|:......:..|||.|....:.:|.::...
pombe   212 DLQQLRRSTLELLSMIERVSD----------YVQNVIDGSSPANVAVGRYLMKCFSLIPCVEGQD 266

  Fly   249 FRVMFNTNLRDMLMAITLSTMIKTQLEISEKLSCM 283
            |..:|:::|:|:|:.:.|:..::||::|:.:|:.:
pombe   267 FEKIFSSHLQDVLVVVYLANTLRTQVDIASRLNLL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 78/290 (27%)
SPBC4C3.07NP_596298.1 MPN_eIF3f 23..298 CDD:163695 78/290 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 92 1.000 Domainoid score I2004
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I1320
OMA 1 1.010 - - QHG54712
OrthoFinder 1 1.000 - - FOG0004972
OrthoInspector 1 1.000 - - otm47055
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10540
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3506
TreeFam 1 0.960 - -
1110.930

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