DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3f2 and Psmd7

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_034947.1 Gene:Psmd7 / 17463 MGIID:1351511 Length:321 Species:Mus musculus


Alignment Length:272 Identity:66/272 - (24%)
Similarity:122/272 - (44%) Gaps:21/272 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVYLKPLVFFQIIDAYDRRPKGDNQ--VMGTLLGRNKEGHIEITNCFTVPHKEHSENKRI-DLDM 72
            ||.:.|||...::|.::|..|..||  |:|.|||..::..::::|.|.||..|..::..: .||.
Mouse     8 KVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDH 72

  Fly    73 AYASEVLELNMFAYPN--ERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRL 135
            .|...:  ..||...|  ||::||:.||..:.::...|::...|.|  ...:.:::|...|:..|
Mouse    73 DYLENM--YGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYC--PNSVLVIIDVKPKDLGL 133

  Fly   136 STRLYCAVEMGVPGGT-KGLMFSLVPLEISNENSDLVA----LRCIEKQSQQQASKQMERFVPEL 195
            .|..|.:||.....|| ....|..|..||..|.::.|.    ||.|:..:....|::       :
Mouse   134 PTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQR-------I 191

  Fly   196 AQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFNTNLRDM 260
            ...|...:.:..:|..:..|:..|.:.|...::.:...|......:|.....:|...|.....|.
Mouse   192 TNQVHGLKGLNSKLLDIRSYLEKVASGKLPINHQIIYQLQDVFNLLPDASLQEFVKAFYLKTNDQ 256

  Fly   261 LMAITLSTMIKT 272
            ::.:.|:::|::
Mouse   257 MVVVYLASLIRS 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 65/271 (24%)
Psmd7NP_034947.1 MPN_RPN7_8 7..285 CDD:163693 66/272 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..321
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.