DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3f2 and Rpn8

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:XP_320392.5 Gene:Rpn8 / 1280542 VectorBaseID:AGAMI1_014728 Length:338 Species:Anopheles gambiae


Alignment Length:288 Identity:81/288 - (28%)
Similarity:136/288 - (47%) Gaps:30/288 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVYLKPLVFFQIIDAYDRRPKGDNQ--VMGTLLG--RNKEGHIEITNCFTVPHKEHSENKRI-DL 70
            ||.:.|||...::|.::|..|..||  |:|.|||  |.| |.::::|.|.||..|..::|.: .|
Mosquito     9 KVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRAK-GVLDVSNSFAVPFDEDDKDKSVWFL 72

  Fly    71 DMAYASEVLELNMFAYPN--ERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQ 133
            |..|...:  ..||...|  |||:||:.||..:.::...|:: .:|..|....| :::||..|:.
Mosquito    73 DHDYLENM--YGMFKKVNARERVVGWYHTGPKLCQNDIAINE-LIRRYCPNSVL-VIIDAKPKDL 133

  Fly   134 RLSTRLYCAV-EMGVPGGTKGLMFSLVPLEISNENSDLVA----LRCIEKQSQQQASKQMERFVP 193
            .|.|..|.|| |:...|......|..||.||..|.::.|.    ||.|:..:....|:::...:.
Mosquito   134 GLPTEAYIAVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLL 198

  Fly   194 ELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDN-VVGRSLYAALTAVPLLDSDKFRVMFNTNL 257
            .|..:....||::|.|   |:..|..|     |.| .:...|...|..:|.:..:.|........
Mosquito   199 GLKGLNAQLRDIKHYL---LKVGNGQL-----PINHQIVYQLQDILNLLPDIAQENFTDTLYVKT 255

  Fly   258 RDMLMAITLSTMIKTQLE----ISEKLS 281
            .|.::.:.|::::::.:.    |:.||:
Mosquito   256 NDQMLVVYLASLVRSIIALHNLINNKLT 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 78/284 (27%)
Rpn8XP_320392.5 None

Return to query results.
Submit another query.