DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f2 and CSN6

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:XP_061510219.1 Gene:CSN6 / 1277806 VectorBaseID:AGAMI1_012919 Length:366 Species:Anopheles gambiae


Alignment Length:287 Identity:70/287 - (24%)
Similarity:123/287 - (42%) Gaps:28/287 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LKPLVFFQIIDAYDR-------RPKGDNQVMGTLLGRNKEGHIEITNCFTVPHKEHSENKRIDLD 71
            |.|||...|.|.:.|       ||    .:.|.|:|:.|..:||:.|.|.:  |....|..:.:.
Mosquito    82 LHPLVIMNIADHWTRNRAQKSSRP----LIFGALIGKQKGRNIEVMNSFEL--KYDIVNDAVVIA 140

  Fly    72 MAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYY--VRECCEGQPLHLLVDAALKNQR 134
            |.|.....|.....:.:...|||:.|....|.....||...  :.||    ||.||:|...:|..
Mosquito   141 MDYYQVKEEQYKQVFSDLDFLGWYTTDTVPSEKHINIHKQICEINEC----PLMLLLDPLNRNMN 201

  Fly   135 LSTRLYCAVEMGVPGGTKGLMFSLVPL--EISNENSDLVALRCIEKQSQQQASKQMERFVPELAQ 197
            |...||.:| :.:..|...::|  |||  .::.|.::.:.:..:.:.|..............|||
Mosquito   202 LPISLYESV-IDIVQGQAMMLF--VPLVYTLATEEAERIGVDHVARMSNNDTDANSTVAEHLLAQ 263

  Fly   198 VVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFNTNLRDMLM 262
             .:|.:.:..|:.::|.||..|...:.||:..:.|..|:....:|::.:..|:..|.|...|:.:
Mosquito   264 -YNAIKMLNSRVKIILAYIKAVENDQLKPNQEILRMAYSLSRRLPIVQNPSFKEEFYTQSNDVGL 327

  Fly   263 AITLSTMIKTQLEISE---KLSCMQDQ 286
            ...|..:.|...::::   |.:.:.|:
Mosquito   328 ITYLGALTKVANDMNQLVNKFNVLYDR 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 68/279 (24%)
CSN6XP_061510219.1 None

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