DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3f2 and PSMD14

DIOPT Version :10

Sequence 1:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_005796.1 Gene:PSMD14 / 10213 HGNCID:16889 Length:310 Species:Homo sapiens


Alignment Length:86 Identity:17/86 - (19%)
Similarity:40/86 - (46%) Gaps:4/86 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRNKEGH-IEITNCFTVPHKEHSENKRIDLDMAY 74
            :||:..|...:::.  ..|.....:|||.:||...:.: :.:.:.|.:|......:... :|..:
Human    30 QVYISSLALLKMLK--HGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEA-VDPVF 91

  Fly    75 ASEVLELNMFAYPNERVLGWF 95
            .:::|::.......|.|:||:
Human    92 QAKMLDMLKQTGRPEMVVGWY 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 17/85 (20%)
PSMD14NP_005796.1 MPN_RPN11_CSN5 21..286 CDD:163700 17/86 (20%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 113..126 17/86 (20%)

Return to query results.
Submit another query.