DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptr and ptch2

DIOPT Version :10

Sequence 1:NP_610209.2 Gene:Ptr / 35546 FlyBaseID:FBgn0262867 Length:1169 Species:Drosophila melanogaster
Sequence 2:NP_571063.2 Gene:ptch2 / 30181 ZFINID:ZDB-GENE-980526-44 Length:1442 Species:Danio rerio


Alignment Length:1267 Identity:242/1267 - (19%)
Similarity:439/1267 - (34%) Gaps:407/1267 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 IQNATTTYDGDTYTYKDNCARWENECF--------ENDILNLDALMDDIEAGQLNLTFPFMFNPV 181
            :.|......|..:.:......|:.|..        :|.:.:.:||.          |...:.:|.
Zfish   299 VPNIAAELQGGCHGFSKKFMHWQEELILGERVKDSQNALQSAEALQ----------TMFLLMSPK 353

  Fly   182 TWDAHLFPVFFGGTKLTEDNYVISVPAIQLVYFVTADTKRQDAKGAEWEETFLRVVGNA--ENSG 244
            ....|.           :|:|.|        :.:..:..:..|....|:..|:.||..:  :||.
Zfish   354 QLYEHF-----------KDDYEI--------HDINWNEDKATAILESWQRKFVEVVHGSIPQNSS 399

  Fly   245 QFKHISVSYFASRTLDHELEKNTKTVVPYFSSTFLLMGLFSIITCMMGDAVRSKPFLGLMGNVSA 309
            .    :|..|::.||:..::..:...|...:..:|||..::.:|.:..|..:|:..:||.|.:..
Zfish   400 S----NVYAFSTTTLNDIMKSFSDVSVIRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLV 460

  Fly   310 IMATLAAFGLAMYCGIEFIGINLAA----PFLMIGIGIDDTFVMLAGWRRTKAKMPVAERMGLMM 370
            .::..|..||....|:.|   |.|.    |||.:|||:||.|::...:..|::.:|..||.|..:
Zfish   461 ALSVAAGLGLCSLLGLSF---NAATTQVLPFLALGIGVDDMFLLAHSFTETRSNIPFKERTGDCL 522

  Fly   371 SEAAVSITITSVTDFISFLIGIISPFRSVRIFCTYSVFAVCFTFLWHITFFAACMAISGYRERKN 435
            .....|:.:||:.:.|:|.:..:.|..::|.|...:...|.|.|...:..|.|.:::..:|....
Zfish   523 RRTGTSVALTSINNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSLDLHRREDK 587

  Fly   436 LHSIFGC----------RVQPMSVAIKEKRNFLYKAIMAGGIDAND-----PDNP------IDNK 479
            ...|..|          ::||..::                 ||||     |..|      |...
Zfish   588 RLDILCCFYSPCSSRVIQIQPQELS-----------------DANDNHQRAPATPTYTGSTITTS 635

  Fly   480 DHM-------------------------------------------------------------- 482
            .|:                                                              
Zfish   636 THITTTVQAFTQCDAAGQHIVTILPPTSQISTTPPSMVLSTPTPTTDPYGSQVFTTSSSTRDLLA 700

  Fly   483 --------------------LMAFFKDKMAAVINNKWCKAIIILAFASYLVGACYGITQIKEGLE 527
                                |.:|.::|.|.::.....|.::::.|.:.|..:.||.|.:.:||.
Zfish   701 QVEEPKEGRECVPLPFFRWNLSSFAREKYAPLLLKPETKTVVVVVFVALLSLSLYGTTMVHDGLY 765

  Fly   528 RRKLSREDSYSVEFFDREDDYYREFPYRMQVIIAGPLNYSDPLVQEQVENLTSTLEHTSYVTS-- 590
            ...:...|:...||...:..|: .| |.|.::.....:|:..  |.|:..|.:......||..  
Zfish   766 LTDIVPRDTQEYEFITAQFKYF-SF-YNMYLVTMDGFDYARS--QRQLLQLHNAFNSVKYVVKDG 826

  Fly   591 --------RRYTESWLRSFLSFLERNNELLNVTVDDEQTFID-------------AVKEHWLFPG 634
                    ..|.:.||:...:..:.:.|...:|.|..:...:             :.||    |.
Zfish   827 NHKLPRMWLHYFQDWLKGLQATFDADWEAGKITYDSYRNGTEDGALAYKLLIQTGSKKE----PF 887

  Fly   635 NPFSLDVRFNEDETQIIASRFLIQAVNITDTN--------------HEKEMVRD--------LRQ 677
            |...|..|...||..:|........:.:..:|              |.:|.:.|        || 
Zfish   888 NYSQLTSRRLVDEDGLIPPEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYDTTGENLR- 951

  Fly   678 ICKDSPLNASIFHPYFV--------FFDQFELVRPVSLQAM------------------------ 710
            |....||..:.| |:::        |.:..|.||.:..:.|                        
Zfish   952 IPAAEPLEFAQF-PFYLNGLRQASDFIEAIESVRTICEEFMRQGIKNYPNGYPFLFWEQYIGLRH 1015

  Fly   711 --VIGAIIMMIISFVFIPNILCSLWVA------FSVISIELGVAGYMALWDVNLDSISMINLIMC 767
              ::...:::..:|:....:|.:.|.|      .:::::||  .|.|.|..:.|.:|.::.||..
Zfish  1016 WFLLSISVVLACTFLVCAILLLNPWTAGVIVFILAMMTVEL--FGIMGLIGIKLSAIPVVILIAS 1078

  Fly   768 IGFSVDFTAHICYTYMSS-KKRSPKARVREALHSLGLPIIQGSSSTILGIVALLLAQS---YIFL 828
            :|..|:||.||...:::: ..|:.::.|  |:..:..|:|.|:.||:||:  |:||.|   :|..
Zfish  1079 VGIGVEFTVHIALGFLTAIGDRNTRSAV--AMEHMFAPVIDGAISTLLGV--LMLAGSEFDFIMR 1139

  Fly   829 VFFKMVFLVIFFGAMHGLFLLPVLLSLFGPGSCLTWTGKDDGSDAEVDDGLDDRQLEKPFSQSYY 893
            .||.::.::...|.::||.||||||||.||             .|||....:...|:.|..:.  
Zfish  1140 YFFAVLAILTLLGILNGLVLLPVLLSLMGP-------------PAEVVPANNANHLQSPSPEP-- 1189

  Fly   894 MQYPSIGINGPYGSKGFL-GAPYKAYGVDEKDLGLGTSGEDSSESSSSRSQHRQQAAAT----EE 953
             ..|.:..:|.|.  |.: .|.::|:                  |.:|.|::..:...|    ||
Zfish  1190 -MPPPMNHHGYYA--GHIPKASHQAF------------------SETSDSEYYSETTTTSGIGEE 1233

  Fly   954 EVVVRESPTRRYDDGWRRSSYQNIYGQGAAQFQAQPDLYGKQVSATEWRQRLDTHEQQQRQRQRR 1018
            |.        :|.|   ||:|        ....|||.               .||...:..:...
Zfish  1234 EY--------KYCD---RSTY--------ITPPAQPP---------------TTHILLEASKNPS 1264

  Fly  1019 -------SPFENYRQDVEIDMQKARRNSHGDVIDLHGTPNSSVEERFRRRGEPFSAESGDDSSYR 1076
                   .||.      |:...:.::|:...:        ||..:|:..:.|        |...|
Zfish  1265 FPKLTVVKPFH------EVQNCETKQNAVNSI--------SSQIKRWDNKNE--------DQGQR 1307

  Fly  1077 HQQIMAMPAAGSAPSAKRYHRRRSSEDSTSRHQRWPANIEERRARRAYSPAHNRPETALTSYAYR 1141
            .|.:         |:.:...:||:::......|   ...:::....|::.|...|..|:|.....
Zfish  1308 RQHL---------PTDRTNCQRRTTQCGPGPQQ---GTGQQQNRTTAHTGALQHPNNAITMVTAT 1360

  Fly  1142 SS----SHHNLYQPNGKSSKYPPTYQYGDYYH 1169
            :|    .|.:|          |.:||  .|.|
Zfish  1361 ASVTVAVHPSL----------PGSYQ--GYMH 1380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtrNP_610209.2 Patched 53..845 CDD:308203 174/925 (19%)
ptch2NP_571063.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
2A060602 31..1182 CDD:273338 189/964 (20%)
Blue background indicates that the domain is not in the aligned region.

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