Sequence 1: | NP_001246145.1 | Gene: | Ptr / 35546 | FlyBaseID: | FBgn0262867 | Length: | 1169 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997125.2 | Gene: | Npc1l1 / 237636 | MGIID: | 2685089 | Length: | 1333 | Species: | Mus musculus |
Alignment Length: | 1061 | Identity: | 226/1061 - (21%) |
---|---|---|---|
Similarity: | 421/1061 - (39%) | Gaps: | 248/1061 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 LNKSFYHLGICIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIAGEGKTERAIVEQYF 76
Fly 77 KVNYTHRFNVGRITRPGRFGRVIVITKD-----------GDEN---MIRREVFQELRQLDNIIQ- 126
Fly 127 -------------------------NATTTYDGDTYTYKDNCARWENECFENDILNLDALMDDIE 166
Fly 167 AGQLNLT-----FPFMFN-PVT--------------WDAHLFPVF----FGGTKLTEDNYVISVP 207
Fly 208 AIQLVYFVT---ADTKRQDAKGAEWEETFLRVVGNAENSGQFKHISVSYFASRTLDHELEKNTKT 269
Fly 270 VVPYFSSTFLLMGLFSIITCMMGD-------AVRSKPFLGLMGNVSAIMATLAAFGLAMYCGI-E 326
Fly 327 FIGINLAAPFLMIGIGIDDTFVMLAGWRRTKAKMPVAER---MGLMMSEAAVSITITSVTDFISF 388
Fly 389 LIGIISPFRSVRIFCTYSVFAVCFTFLWHITFFAACMAISGYRERKNLHSIFGCRVQPMSVAIKE 453
Fly 454 KRNFLYKAIMAGGIDANDPDNPIDNKDHMLMAFFKDKMAAVINNKWCKAIIILAFASYLVGACYG 518
Fly 519 ITQIKEGLERRKLSREDSYSVE---------------FFDREDDYYREFPYRMQVII--AGPLNY 566
Fly 567 SDPLVQEQVENLTSTLEHTSYVTSRRY----TESWLRSFLSFLERNNELLNVTV----DDE---- 619
Fly 620 -QTFIDAVKE----------------H----WLFPGNP-----------FSLDVRFNEDETQIIA 652
Fly 653 SRFLIQAVNITDTNHEKEMVR-----------DLRQICKDSPLNASIFHPYF---VFFDQFELVR 703
Fly 704 PVSLQAMVIGAIIMMIISFVFIP-NILCSLWVAFSVISIELGVAGYMALWDVNLDSISMINLIMC 767
Fly 768 IGFSVDFTAHICYTYMSSKKRSPKARVREALHSLGLPIIQGSSST-ILGIVALLLAQSYIF-LVF 830
Fly 831 FKMVFLVIFFGAMHGLFLLPVLLSLFGPGSCLTWTGKDDGSDAEVDDGLDDR------QLEKPFS 889
Fly 890 QSYYMQYPSIGINGPYGSKGF 910 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptr | NP_001246145.1 | Patched | 53..845 | CDD:280598 | 200/947 (21%) |
Sterol-sensing | 295..442 | CDD:289145 | 43/150 (29%) | ||
Npc1l1 | NP_997125.2 | NPC1_N | 30..283 | CDD:293023 | |
2A060601 | 32..1267 | CDD:273337 | 214/1000 (21%) | ||
Sterol-sensing | 684..815 | CDD:289145 | 35/140 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167845385 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |