DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptr and ptr-9

DIOPT Version :9

Sequence 1:NP_001246145.1 Gene:Ptr / 35546 FlyBaseID:FBgn0262867 Length:1169 Species:Drosophila melanogaster
Sequence 2:NP_499030.2 Gene:ptr-9 / 191747 WormBaseID:WBGene00004223 Length:844 Species:Caenorhabditis elegans


Alignment Length:890 Identity:233/890 - (26%)
Similarity:415/890 - (46%) Gaps:111/890 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KTLN------KSFYHLGICIAKHPGYFIIIPVLLTL----LCMTGYQQLKYQIDPEYLFSPIAGE 64
            |:||      :.|.:....:.:.|..|||||.|||.    |.:|.: .|....|...:|.|  .:
 Worm     2 KSLNFQSVVSQFFEYESTVVVRWPLPFIIIPPLLTFSIVTLTVTNF-HLNVTNDTLQVFLP--DD 63

  Fly    65 GKTERAIVE--QYFKVNYTHR--FNVGRITRPGRFGRVIVIT----KDGDENMIRREVFQELRQL 121
            .::.|.:.|  :.|......|  :::        ||...|.|    ...|.|::.....|.:.:|
 Worm    64 MRSLRDLKELLRLFPPRDAQRDTYSI--------FGSKFVYTVIEDDSSDGNILSSSGIQRMSKL 120

  Fly   122 DNIIQNATTTYDGDTYTYKDNCARWENE--CFENDILNLDALMDDIE--AGQLNLTFP-FMFNPV 181
            ...:....|:. ||...  .||.|.:::  |..:.|  ..||.|...  |.|..|.:| ..|...
 Worm   121 HKFVMGLETSL-GDNVA--SNCLRNKDDEACTMHPI--AFALEDTTPEFAIQFLLRYPNLKFGDF 180

  Fly   182 TWDAHLFPVFFGGTKL---TED----NYVISVPAIQLVYFVTADTKRQDAKGAEWEETFLRVVGN 239
            ..|.   .:.||..::   ::|    :.:.|..|:::.|.:.:....:     .|.:.||..:..
 Worm   181 VIDN---AMVFGDVRIEPKSQDRDGNSPIRSSKAVRMTYILESSESTE-----RWIDLFLSAIPR 237

  Fly   240 AENSGQFKHISVSYFASRTLDHELEKNTKTVVPYFSSTFLLMGLFSIITCMMGDAVRSKPFLGLM 304
            .:.:..    ::.:.:|::|..|:|:|.:.::|:...|.|::.:|.:..|...:.|:|:||:|..
 Worm   238 YKETNS----TIFWSSSKSLAKEMERNGELLIPWMPWTSLVLVVFCMFACSSLNIVKSQPFIGFF 298

  Fly   305 GNVSAIMATLAAFGLAMYCGIEFIGINLAAPFLMIGIGIDDTFVMLAGWRRTKAKMPVAERMGLM 369
            ...:|.|||:|:..|.:|....|:.:....|||::.||.|:.|:||..||.||......:|....
 Worm   299 AMFNATMATIASTSLLLYLQYPFLPLVFIMPFLVVSIGTDNMFLMLKSWRMTKKSSNEEQRYIHA 363

  Fly   370 MSEAAVSITITSVTDFISFLIGIISPFRSVRIFCTYSVFAVCFTFLWHITFFAACMAISGYRERK 434
            ::|:|.|:.:||:||.:||.||.||.|.:||:||||...|:.|.||:.:|||.|.|::...||..
 Worm   364 LTESAASLFLTSLTDGLSFAIGSISDFHAVRVFCTYCAMAILFMFLFQVTFFNAVMSLCCRREVS 428

  Fly   435 NLHSIFGCR--VQPMSVAIKEKR-NFLYKAIMAGGIDANDPDNPIDNKDHMLMAFFKDKMAAVIN 496
            ..|.:|.|.  ..|....:.||: ||.:.:|:|               .|:    ||     ::|
 Worm   429 GKHPVFCCYEITPPEETQVLEKQSNFDFSSIVA---------------KHL----FK-----ILN 469

  Fly   497 NKWCKAIIILAFASYLVGACYGITQIKEGLERRKLSREDSYSVEFFDREDDYYREF-PYRMQVII 560
            ....:..:...|.:||..:.:....:..||:.:.|:.:|||..:..:.::..:.:: .:...::.
 Worm   470 PLPSRIGVFFIFLAYLFISIHFAIGLPLGLDLKLLAPDDSYVSKELEAQERLFADYGGFCFALVR 534

  Fly   561 AGPLNYSDPLVQEQVENLTSTLEHTSYVTSRRYTESWLRSFLSFLERNNELLNVT----VDDEQT 621
            |..::..||:|:..:..|...|..:.|.:.   :|.||..|    |:.|.....:    .|:..|
 Worm   535 AENISLKDPMVRRNLIGLYRDLGGSEYSSP---SEFWLDPF----EKKNRGKKYSESDFSDELHT 592

  Fly   622 FIDAVKEHWLFPGNPFSLDVRFNEDETQIIASRFLIQAVNITDTNHEKEMVRDLRQICKDSPLNA 686
            |:  .||    |...|..|:||.. ..:|.|.:.:.:...:...| :......:|::.::|..|.
 Worm   593 FL--AKE----PHLKFRNDIRFTM-MGKIEAMKMMFRVRKLGKDN-DAPRAEYMRKVMENSQFNG 649

  Fly   687 SIFHPYFVFFDQFELVRPVSLQAMVIGAIIMMI-ISFVFIPNILCSLWVAFSVISIELGVAGYMA 750
            .::...|:..|| ::....::...|:.||:.|: |..:.:|..:.::.:||:::|:.:||.|.:|
 Worm   650 FVYDTSFLLVDQ-QMTTVYNVIVDVVSAILTMLSICVLMVPRPVSAMCIAFAILSVNIGVIGALA 713

  Fly   751 LWDVNLDSISMINLIMCIGFSVDFTAHICYTYMSSKKRSPKARVREALHSLGLPIIQGSSSTILG 815
            ..:..||.||||.::|.:|||||:..|..:.::..:..    |:.:.|..:..||:|.:.||.:|
 Worm   714 ATNTRLDIISMITIVMSVGFSVDYVTHTTFHFVIQRDN----RLEKCLLVMTEPILQSALSTAIG 774

  Fly   816 IVALLLAQSYIFLVFFKMVFLVIFFGAMHGLFLLPVLLSLFGPGS 860
            :..|....|||...|...||.|:..|.:|||..|||||....|.|
 Worm   775 VSLLSFVHSYIVRTFVNTVFFVVGLGILHGLIFLPVLLDTIVPDS 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtrNP_001246145.1 Patched 53..845 CDD:280598 207/820 (25%)
Sterol-sensing 295..442 CDD:289145 60/146 (41%)
ptr-9NP_499030.2 Patched 52..817 CDD:280598 215/835 (26%)
Sterol-sensing 288..439 CDD:289145 61/150 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1934
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D210960at2759
OrthoFinder 1 1.000 - - FOG0001635
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10796
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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