DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptr and ptr-23

DIOPT Version :10

Sequence 1:NP_610209.2 Gene:Ptr / 35546 FlyBaseID:FBgn0262867 Length:1169 Species:Drosophila melanogaster
Sequence 2:NP_493603.1 Gene:ptr-23 / 173362 WormBaseID:WBGene00004237 Length:983 Species:Caenorhabditis elegans


Alignment Length:995 Identity:226/995 - (22%)
Similarity:400/995 - (40%) Gaps:218/995 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FYHLGICIAKHPGYFIIIPVLLTLLC------------MTGYQQLKYQIDPEYLFSPIAGEGKTE 68
            |...|..||||....|:|.::::.|.            :|||             :|.....|.|
 Worm    40 FRKWGFLIAKHAWLAILICLIISTLAIVKILLTKQANDITGY-------------TPYGARAKDE 91

  Fly    69 RAIVEQYFKVN------YTHRFNVGRITRPGRFGRVIVITKDGDENMIRREVFQELRQLDNIIQN 127
            ....:::|..:      |.:                 ::.|| :.:|.|.:...|..|:.|...|
 Worm    92 YLEYQKFFSSSGLPIAAYLY-----------------IVAKD-EGSMSRPDYLDETIQVLNFALN 138

  Fly   128 ATTTYD---GDTYTYKDNCARWENECFENDIL-----NLDALMDDIEAGQLNLTFP--------F 176
            ..|.||   |.:.|:...|   ::.|..|:.:     ....|.|..:..::.:.:|        |
 Worm   139 NITMYDSISGKSETFNQFC---QSFCQINEPVRQFYNGYQILSDGEQNSRIKIQYPVSDMFGRQF 200

  Fly   177 MFNPVTWDAHLF----------------PVF-FGGTKLTEDNYVISVPAIQLVYFVTADTKRQ-- 222
            ...|..:...||                ||. ...|||.:.  |..:..::.|..:|...:.:  
 Worm   201 SLQPNFFGVELFDQPDDAAKLLDSADGDPVIELNATKLVDP--VSRITNVKSVKMITLQFRAEHK 263

  Fly   223 ----DAKGAEWEETFLRVVGNAENSGQFKHISVSYFASRTLDHELEKNTKTVVPYFSSTFLLMGL 283
                :|:..:||.:.:.:.....||   |.:.:..::...::.|:.:....::||....|.:|.|
 Worm   264 PGWTEAQVKKWEMSLVDIFEKRYNS---KRLKIYAYSQSYVEEEMVRGGIIMIPYLVVGFAIMCL 325

  Fly   284 FSIITCMMGDAVRS---------KPFLGLMGNVSAIMATLAAFGLAMYCGIEFIGINLAAPFLMI 339
            .|.:..|    :|:         |..|.:|..::.::|...|..|...||:.|..|....|||::
 Worm   326 CSCVLVM----IRALYMHQENGYKIILAIMACLTPLLACATALALMFLCGVRFASILCVIPFLVL 386

  Fly   340 GIGIDDTFVMLAGWRRT--------KAKMPVAERMGLMMSEAAVSITITSVTDFISFLIGIISPF 396
            .||:|.:::|:..|:|.        :.|..|..||..:|:|...:|.|:.:|:..:..:|..:..
 Worm   387 SIGVDSSYLMIHEWQRVTKHMRETPRKKDSVGHRMSEVMAEVGPAILISCLTNMFADAVGSFTSS 451

  Fly   397 RSVRIFCTYSVFAVCFTFLWHITFFAACMAISGYRERKNLHSIFGCRVQPMSVAIKEKRNFLYKA 461
            ..:.:.||.::.::.|.|::.:||:|..|:|.|..|       ||      |..|.:.|      
 Worm   452 PEITLLCTGNMLSMWFAFIYQMTFYAGLMSIVGGYE-------FG------SDEIDKNR------ 497

  Fly   462 IMAGGIDANDPDNPIDNKDH-----MLMAFFKDKMAAVINNKWCK-----------AIIILAFAS 510
                 ::.|..:|.::...|     ...:.|.:....:|::...|           ..:.|.:.:
 Worm   498 -----MEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYTHLMTTPLVFVSVCLVYIA 557

  Fly   511 YLVGACYGITQIKEGLERRKLSREDSYSVEFFDREDDYYREFP-YRM-QVIIAGPLNYSDPLVQE 573
            ||..:.|||||:...|..:||...||..:|..|....|  :.| |.| .|.:..|....:|...:
 Worm   558 YLAFSVYGITQLNINLTAQKLFALDSPLLELDDLRIKY--QVPVYSMATVFVNTPGKLENPARLK 620

  Fly   574 QVENLTSTLEHTSYVTSRRYTESWLRSFLSFLERNNELLNVTV----DDEQTFIDAVKEHWLFPG 634
            ::......:|.    .:..:.|.|......:..|:.::...:.    :|::.|:|..|     |.
 Worm   621 RLNEFVREMES----INGTWGEGWGELGTKYFVRDYDVFQQSFGSEDEDDEDFMDDDK-----PV 676

  Fly   635 NPFSLD-VRFNEDETQIIA--------SRF--LIQAVNITDTNHEK------------------- 669
            ...|.| :.:.|||.:...        ..|  |..|.|.||...|:                   
 Worm   677 TVHSDDKMTYREDELKYFLKWPEYDFWQGFVKLRNATNSTDPEAEELDRFFFTTGYHGDNLTIWT 741

  Fly   670 ---EMVRDLRQICKDSP-LNASIFHPYFVFFDQFELVRPVSLQAMVIGAII-MMIISFVFIPNIL 729
               ||:|..||:....| ..||:||...|:.|..:.: |......::|.:: |.::.|||:.|..
 Worm   742 QRGEMLRAWRQVVDKYPDFGASVFHEDGVYLDLIDNM-PTDTWQSILGTLVCMAMVCFVFLNNWF 805

  Fly   730 CSLWVAFSVISIELGVAGYMALWDVNLDSISMINLIMCIGFSVDFTAHICYTYMSSKKRS----- 789
            .....:.||:||..|:.|:::.|.|:||.|:|..:|:.||||||..||:.|.|..:..:.     
 Worm   806 TVAIASLSVLSICAGILGFLSWWKVDLDPITMAAMIISIGFSVDIPAHVSYHYYQASIQEGPMSP 870

  Fly   790 PKARVREALHSLGLPIIQGSSSTILGIVALLLAQSYIFLVFFKMVFLVIFFGAMHGLFLLPVLLS 854
            |.:|:...|.|:..|.:|.:.||||.:.:||....|:..||.|.:.|.:....:|||..||.:|.
 Worm   871 PSSRLANCLSSVAFPALQAALSTILCVCSLLFVNLYMAEVFVKTMVLCVVLCNLHGLVFLPAILI 935

  Fly   855 LFGPGSCLTWTGKDDGSDAE 874
            |.   ..:.|..:..|:.|:
 Worm   936 LL---DSIRWACRPKGAAAQ 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtrNP_610209.2 Patched 53..845 CDD:308203 204/915 (22%)
ptr-23NP_493603.1 Patched 68..938 CDD:308203 214/951 (23%)

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