DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptr and LOC100331480

DIOPT Version :9

Sequence 1:NP_001246145.1 Gene:Ptr / 35546 FlyBaseID:FBgn0262867 Length:1169 Species:Drosophila melanogaster
Sequence 2:XP_002667290.4 Gene:LOC100331480 / 100331480 -ID:- Length:835 Species:Danio rerio


Alignment Length:866 Identity:285/866 - (32%)
Similarity:464/866 - (53%) Gaps:51/866 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TCGISCVDKTLNKSFYHLGICIAKHPGYFIIIPVLLTLLCMTGY---QQLKYQIDPEYLFSPIAG 63
            :|...|::|.:.:.|..||..:..||.:|:::|::::.....|:   .:||.. |....|:|..|
Zfish     3 SCTTDCIEKPIRRCFESLGKFVGLHPWWFVVLPLVMSAGLGGGFFFLNELKSD-DIVEQFTPKKG 66

  Fly    64 EGKTERAIVEQYFKVNYTHRFNVGRITRPGRFGRVIVITKDGDENMIRREVFQELRQLDNIIQNA 128
            ..|.||...::.|..: ..:|:|.||...|.|..:|.   ....|::......|:.::|..|:..
Zfish    67 RAKMERRFFQETFPQS-DSQFSVIRINTDGVFASLIF---SSQSNILSVTALDEIIRIDVKIKRF 127

  Fly   129 TTTYDGDTYTYKDNCARWENECFENDILNLDALMDDIEAGQLNLTFP----FMFNPVTWDAHLFP 189
            :.:.|.:|:.:.|.||.....|..|.||::.. .:......:|:|:|    ..||.|    ||..
Zfish   128 SVSLDTNTFAFSDICADVNGTCNSNVILDVFG-YNASNVSFVNMTYPKYCRSEFNCV----HLGN 187

  Fly   190 VFFGGTKLTEDNYVISVPAIQLVYFVTADTKRQDAKGAEWEETFLRVVGNAENSGQFKHISVSYF 254
            | ....::.:|.:|.|..|::|.|::   .:..|.....|.:..:.|:.|...|    ...||||
Zfish   188 V-ISEVEVDQDGFVQSAKAVRLFYYL---QENNDTLTDAWLQKLMDVLSNVTTS----QTEVSYF 244

  Fly   255 ASRTLDHELEKNTKTVVPYFSSTFLLMGLFSIITCMMGDAVRSKPFLGLMGNVSAIMATLAAFGL 319
            .|.:...|.||:|::|...|:.|:.|...|||::|:..|.||:|.:|..:|..|...|.|::|||
Zfish   245 TSMSRQQEFEKSTRSVTQLFAVTYFLAISFSIMSCLRFDNVRNKAWLASLGVFSTAQAVLSSFGL 309

  Fly   320 AMYCGIEFIGINLAAPFLMIGIGIDDTFVMLAGWRRTKAKMPVAERMGLMMSEAAVSITITSVTD 384
            .:...:.|:....::|||::||||||.|:|::.|:||..:..|.:||.....|||:|||||::||
Zfish   310 LLLLNVPFVITAASSPFLILGIGIDDMFIMISSWQRTNIQDSVPKRMSDTYREAAISITITTLTD 374

  Fly   385 FISFLIGIISPFRSVRIFCTYSVFAVCFTFLWHITFFAACMAISGYRERKNLHSIFGCRVQPMSV 449
            .::|.:...:||.||:.||.|:..||...:.::||||.||:|::|.||..|.|.: .|...|..:
Zfish   375 VLAFYLSFSNPFGSVQSFCLYAGTAVLLCYFYNITFFGACLALNGRREGANKHWL-TCMKVPEEM 438

  Fly   450 AIKEKRNFLYKAIMAGGIDANDPDNPIDNKDHMLMAFFKDKMAAVINNKWCKAIIILAFASYLVG 514
            ...|.:  .|.....||   :...|....::|.:..||:......:...||||.::|.:.:|:..
Zfish   439 PPGESK--AYTLCCVGG---SYNRNTGTEEEHPMALFFRKCYGPFLTTSWCKAFVVLIYFTYIGV 498

  Fly   515 ACYGITQIKEGLERRKLSREDSYSVEFFDREDDYYREFPYRMQVIIAGPLNYSDPLVQEQVENLT 579
            :.||..|:|||::.:.|:.:|||.::::|.|..|:..:...:.:.|.|...|.:...:.|:|...
Zfish   499 SVYGCLQLKEGIDLKNLALDDSYIIQYYDAESAYFHYYGPNVMLAINGTFPYWEESERNQLETCI 563

  Fly   580 STLEHTSYVTSRRYTESWLRSFLSFLERNNELLNVTVDDE-QTFIDAVKEHWLFPGNPFSLDVRF 643
            .......:|.|   :.|||.:|    ||.....|::.:.. :|.:....||     ||. |....
Zfish   564 KRFLELDFVNS---STSWLHAF----ERYGVGRNISSEASFKTHLHEFLEH-----NPM-LKQDV 615

  Fly   644 NEDETQIIASRFLIQAV--NITDTNHEKEMVRDLRQICKDSPLNASIFHPYFVFFDQFELVRPVS 706
            |..:..|.|||..:|.:  |.|    ||.:|..||:..:..|....::||.|::.||:.::..|:
Zfish   616 NITDNNITASRLFLQTIVQNAT----EKTVVNSLRKTAEICPYQLLVYHPAFIYHDQYTVIGQVT 676

  Fly   707 LQAMVIGAIIMMIISFVFIPNILCSLWVAFSVISIELGVAGYMALWDVNLDSISMINLIMCIGFS 771
            ||.:.:...:|:.|:.:.||:.||:|||||::.|:.|||.|:|||.::.|||||||||::.||||
Zfish   677 LQTIAVSTAVMLFIALMLIPHPLCALWVAFAIASVILGVTGFMALLNIRLDSISMINLVISIGFS 741

  Fly   772 VDFTAHICYTYMSSKKRSPKARVREALHSLGLPIIQGSSSTILGIVALLLAQSYIFLVFFKMVFL 836
            |||:|||.||::||.|.....|:.|||..||.||:||:.||::|:|.|..:.||||...|.:|.|
Zfish   742 VDFSAHISYTFVSSTKSDVNGRIVEALAHLGYPILQGALSTVVGVVVLSASSSYIFRTLFTIVLL 806

  Fly   837 VIFFGAMHGLFLLPVLLSLFG 857
            ||..|.:||:..:||.|:..|
Zfish   807 VITLGLLHGIAFIPVFLTFCG 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtrNP_001246145.1 Patched 53..845 CDD:280598 266/798 (33%)
Sterol-sensing 295..442 CDD:289145 61/146 (42%)
LOC100331480XP_002667290.4 Patched 54..827 CDD:280598 271/813 (33%)
MMPL 285..427 CDD:304422 60/141 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D210960at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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