Protein Alignment CG11211 and Acan

DIOPT Version :10

• Sequence 1: NP_610208.1
• Gene: CG11211 / 35545
• FlyBaseID: FBgn0033067
• Length: 176
• Species: Drosophila melanogaster
• Sequence 2: NP_071526.2
• Gene: Acan / 58968
• RGDID: 68358
• Length: 2162
• Species: Rattus norvegicus
• Alignment Length: 117
• Identity: 25/117 - (21%)
• Similarity: 53/117 - (45%)
• Gaps: 24/117 - (20%)

  Fly    52 WLEANHVCNRVGAVLATVRNEEQHQLMLHYVNRKERIFGNRTFWLGATN-LVDRSYFWTWMSTGI 115
            |::|...|....:.|:::...|:.:    :||:..:.:.    |:|..: .::..:.|   |.|.
  Rat  1973 WVDAERRCREQQSHLSSIVTPEEQE----FVNKNAQDYQ----WIGLNDRTIEGDFRW---SDGH 2026

  Fly   116 PVTYAQWSRREPKS-DRTGQDACLVLGTDNLWHSE------PCQRKHNFICE 160
            .:.:.:|...:|.: ..||:| |:|:    :||..      ||..:..|.|:
  Rat  2027 SLQFEKWRPNQPDNFFATGED-CVVM----IWHERGEWNDVPCNYQLPFTCK 2073

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11211	NP_610208.1	CLECT	49..160	CDD:153057	24/115 (21%)
Acan	NP_071526.2	Ig_Aggrecan	33..155	CDD:409481
		Ig strand A	33..36	CDD:409481
		Ig strand A'	39..41	CDD:409481
		Ig strand B	45..53	CDD:409481
		Ig strand C	72..78	CDD:409481
		Ig strand C'	83..86	CDD:409481
		Ig strand D	104..109	CDD:409481
		Ig strand E	115..121	CDD:409481
		Ig strand F	129..136	CDD:409481
		Ig strand G	146..155	CDD:409481
		Link_domain_CSPGs_modules_1_3	153..247	CDD:239594
		Link_domain_CSPGs_modules_2_4	254..349	CDD:239597
		Link_domain_CSPGs_modules_1_3	487..581	CDD:239594
		Link_domain_CSPGs_modules_2_4	588..683	CDD:239597
		PHA03247	<666..827	CDD:223021
		FhaB	<809..1669	CDD:442443
		PLN02217	<1591..1753	CDD:215130
		EGF_CA	1910..1946	CDD:238011
		CLECT_CSPGs	1952..2075	CDD:153058	25/117 (21%)
		CCP	2079..2135	CDD:153056