DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11211 and Mrc2

DIOPT Version :9

Sequence 1:NP_610208.1 Gene:CG11211 / 35545 FlyBaseID:FBgn0033067 Length:176 Species:Drosophila melanogaster
Sequence 2:XP_006247693.1 Gene:Mrc2 / 498011 RGDID:1559436 Length:1514 Species:Rattus norvegicus


Alignment Length:138 Identity:40/138 - (28%)
Similarity:62/138 - (44%) Gaps:19/138 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LLQCNAYFSVAGFAE-VNWLEANHVCNRVGAVLATVRNEEQHQLMLHYV-NRKERIFG------- 90
            |..|...||.....| .:|:||..||..:||.|.::.:.|:.    |:| |...:|||       
  Rat   713 LRHCYKVFSSERLQEKKSWIEALGVCRELGAQLLSLASYEEE----HFVANMLNKIFGESEPENH 773

  Fly    91 -NRTFWLGATNLVDR-SYFWTWMSTGIPVTYAQWSRREPKSDRTGQDACLVLGTDNL-WHSEPCQ 152
             ...||:|......| .:.|.| |.|:..:|..::|.:...|..  ..|.||...:| |.:..||
  Rat   774 EQHWFWIGLNRRDPREGHSWRW-SDGLGFSYHNFARSQHDDDNI--RGCAVLDLASLQWVAMQCQ 835

  Fly   153 RKHNFICE 160
            .:.::||:
  Rat   836 TQLDWICK 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11211NP_610208.1 CLECT 49..160 CDD:153057 35/122 (29%)
Mrc2XP_006247693.1 RICIN 77..>161 CDD:238092
RICIN 80..195 CDD:214672
FN2 214..262 CDD:128373
CLECT 281..395 CDD:153057
CLECT 416..539 CDD:214480
CLECT 555..678 CDD:214480
CLECT 703..843 CDD:214480 39/136 (29%)
CLECT 863..985 CDD:214480
CLECT 1006..1142 CDD:214480
CLECT 1165..1277 CDD:214480
CLECT 1294..1427 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.