DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11211 and Reg4

DIOPT Version :9

Sequence 1:NP_610208.1 Gene:CG11211 / 35545 FlyBaseID:FBgn0033067 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001004096.1 Gene:Reg4 / 445583 RGDID:1303341 Length:157 Species:Rattus norvegicus


Alignment Length:128 Identity:29/128 - (22%)
Similarity:51/128 - (39%) Gaps:18/128 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CNAYFSVAGFAEVNWLEANHVCNRV--GAVLATVRNEEQHQLMLHYVNRKERIFGNRTFWLGATN 100
            |..||....    ||..|...|...  |:.||:|.|.::..::..|:...:|   :...|:|..:
  Rat    40 CYGYFRKLR----NWSHAELECQSYGNGSHLASVLNPKEASVISKYITGYQR---SLPVWIGLHD 97

  Fly   101 LVDRSYFWTWMSTGIPVTYAQWSRREPKSDRTGQDACLVLGTDN---LWHSEPCQRKHNFICE 160
             ..::..|.|:. |....|..||.|.....|    .|..:...:   .|:...|.::.:|:|:
  Rat    98 -PQKNASWQWID-GSTNQYRPWSPRTKSEAR----HCTEMNPKDKFLTWNKNGCTKRQHFLCK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11211NP_610208.1 CLECT 49..160 CDD:153057 25/115 (22%)
Reg4NP_001004096.1 CLECT_REG-1_like 29..155 CDD:153064 29/128 (23%)
Carbohydrate-binding. /evidence=ECO:0000250 97..101 0/4 (0%)
Carbohydrate-binding. /evidence=ECO:0000250 134..136 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 1 1.000 - - FOG0000269
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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