DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11211 and Clec4d

DIOPT Version :10

Sequence 1:NP_610208.1 Gene:CG11211 / 35545 FlyBaseID:FBgn0033067 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001003707.2 Gene:Clec4d / 362432 RGDID:1303339 Length:218 Species:Rattus norvegicus


Alignment Length:150 Identity:36/150 - (24%)
Similarity:53/150 - (35%) Gaps:45/150 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CNPL----LQCNAYFSVAGFAEVNWLEANHVCNRVGAVLATVRNEEQHQLMLHYVNRKERIFGNR 92
            |.|:    .|.|.||.:..  ...|.|:...|:.:.:.|.|:..|.:...:              
  Rat    81 CCPVSWRAFQSNCYFPLND--NQTWHESERNCSGMSSHLVTINTEAEQDFV-------------- 129

  Fly    93 TFWLGATNLVDR--SYF-----------WTWM-STGIPVTYAQWSRREPKSDRTGQDACLVLGTD 143
                  |.|:|.  |||           |.|: .|........|...||| |...:| |:||..|
  Rat   130 ------TQLLDEQFSYFLGLSYEKVEGQWQWVDKTPFNPNVVFWKVGEPK-DYMEED-CVVLVYD 186

  Fly   144 N---LWHSEPCQRKHNFICE 160
            .   :|:..||..:...||:
  Rat   187 QDKWVWNDFPCHFEMGRICK 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11211NP_610208.1 CLECT 49..160 CDD:153057 29/127 (23%)
Clec4dNP_001003707.2 CLECT_DC-SIGN_like 82..206 CDD:153060 34/147 (23%)

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