DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11211 and Clec4m

DIOPT Version :10

Sequence 1:NP_610208.1 Gene:CG11211 / 35545 FlyBaseID:FBgn0033067 Length:176 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:136 Identity:34/136 - (25%)
Similarity:56/136 - (41%) Gaps:21/136 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DLTFYQKCNPLLQCNAYFSVAGFAEVNWLEANHVCNRVGAVLATVRNEEQHQLMLHYVNRKERIF 89
            |.||       |..|.||  ...::.||.:|...|....|.|..: |.::.|..|...::     
  Rat   209 DWTF-------LLGNCYF--LSKSQRNWNDAVRACKEEKAQLVII-NSDEEQTFLQLTSK----- 258

  Fly    90 GNRTFWLGATNLVDRSYFWTWM--STGIPVTYAQWSRREPKSDRTGQDACLVLGTDNLWHSEPCQ 152
            .....|:|.::|.:.: .|.|:  ||........|:|.||  :..|::.|:....|. |:...|:
  Rat   259 AKGPTWMGLSDLKNEA-TWLWVDGSTLSSRFQKYWNRGEP--NNIGEEDCVEFAGDG-WNDSKCE 319

  Fly   153 RKHNFI 158
            .|..:|
  Rat   320 LKKFWI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11211NP_610208.1 CLECT 49..160 CDD:153057 27/112 (24%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 34/136 (25%)

Return to query results.
Submit another query.