DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11211 and Reg1a

DIOPT Version :9

Sequence 1:NP_610208.1 Gene:CG11211 / 35545 FlyBaseID:FBgn0033067 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_036773.1 Gene:Reg1a / 24714 RGDID:3552 Length:165 Species:Rattus norvegicus


Alignment Length:131 Identity:29/131 - (22%)
Similarity:52/131 - (39%) Gaps:17/131 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NAYFSVAGF---AEVNWLEANHVC-NRVGAVLATVRNEEQHQLMLHYVNRKERIFGNRTFWLGAT 99
            |||.|...:   ..::|.||:..| |.....|.:|.::.:...:...:........|  .|:|  
  Rat    40 NAYSSYCYYFMEDHLSWAEADLFCQNMNSGYLVSVLSQAEGNFLASLIKESGTTAAN--VWIG-- 100

  Fly   100 NLVD--RSYFWTWMSTGIPVTYAQWSRREPKSDRTGQDACLVLGTDN---LWHSEPCQRKHNFIC 159
             |.|  .:..|.| |:|....|..|....|.:...|.  |:.:.:::   .|....|..:.:|:|
  Rat   101 -LHDPKNNRRWHW-SSGSLFLYKSWDTGYPNNSNRGY--CVSVTSNSGYKKWRDNSCDAQLSFVC 161

  Fly   160 E 160
            :
  Rat   162 K 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11211NP_610208.1 CLECT 49..160 CDD:153057 24/116 (21%)
Reg1aNP_036773.1 CLECT 35..163 CDD:295302 29/131 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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