DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11211 and clec-9

DIOPT Version :9

Sequence 1:NP_610208.1 Gene:CG11211 / 35545 FlyBaseID:FBgn0033067 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_507227.2 Gene:clec-9 / 190567 WormBaseID:WBGene00013493 Length:414 Species:Caenorhabditis elegans


Alignment Length:180 Identity:42/180 - (23%)
Similarity:68/180 - (37%) Gaps:40/180 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLP--FLV---IASSNINNTDLTFYQKCNPLLQCNAYFSVAGFAEVNWLEANHVCNRVGAVLATV 69
            |:|  |||   :|.:.|.....|....     :|..||..|.    |...|.:.|....|.|.||
 Worm     5 SIPLFFLVHYSLAKTPICTNGFTLVNG-----RCLRYFPNAR----NHRAAENSCFSYDATLVTV 60

  Fly    70 RNEEQHQLMLHYVNRKERIFGN--RTFWLG--ATNLVDRSYFWTWMSTGIPVTYAQWSRREPKSD 130
            :|...::.:..:|       ||  .:.|:|  ..|:...:..|. ...|....|..:....|:.:
 Worm    61 KNSIDNRAVSTFV-------GNAASSIWMGLFCFNMDVTNCLWD-DGNGTAQGYNNFMNGSPQIE 117

  Fly   131 RTGQDACLVL----GTDNLWHSEPCQ-RKHNFIC------ENVCQLNYSG 169
             :|:  |:.:    .:...|:|..|. ....|:|      |:.|..||:|
 Worm   118 -SGK--CVYISLMGSSSGRWYSGNCDLDSRPFVCELPITFEDDCSNNYNG 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11211NP_610208.1 CLECT 49..160 CDD:153057 25/125 (20%)
clec-9NP_507227.2 CLECT 22..149 CDD:214480 29/146 (20%)
CLECT 162..277 CDD:214480 2/3 (67%)
CUB 302..409 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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