DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11211 and Clec19a

DIOPT Version :10

Sequence 1:NP_610208.1 Gene:CG11211 / 35545 FlyBaseID:FBgn0033067 Length:176 Species:Drosophila melanogaster
Sequence 2:XP_038953831.1 Gene:Clec19a / 100909498 RGDID:6503302 Length:234 Species:Rattus norvegicus


Alignment Length:199 Identity:40/199 - (20%)
Similarity:69/199 - (34%) Gaps:67/199 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VIASSNINNTDL--------------------TFYQKCNPLLQ----CNAYFSVAGFAEVNWLEA 55
            :|..:|:.|:||                    |...:.:.||:    |..:|.:...    |.||
  Rat     7 MIVQNNLENSDLGTSASLQFREKKIDHNSYWRTTLDEKSRLLEFKGPCXRFFPINKI----WAEA 67

  Fly    56 NHVC-----NRVGAVLATVRNEEQHQLMLHYVNR------KERIFGNRTFWLGATNLVDRSYFWT 109
            |..|     :|..|.:.::.:.|:...:...||.      .:...|.|      .:..:..:.| 
  Rat    68 NIHCPQFTASRKSAKMVSIHSWEESVFVYDLVNSCVPDIPADTCMGLR------VHRQEGQFEW- 125

  Fly   110 WMSTGIPVTYAQWSRREP-----KSDRTGQDACLV-----LGTDNL---------WHSEPCQRKH 155
              |.|.|..|:.|.|.:|     |:::..:...|:     |..|:|         |:.....||.
  Rat   126 --SDGSPYGYSYWDRSQPGDGIQKTEQIVEMQWLLLQWMDLHPDSLLLLFPALKSWNHNTXHRKF 188

  Fly   156 NFIC 159
            .|.|
  Rat   189 PFEC 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11211NP_610208.1 CLECT 49..160 CDD:153057 30/141 (21%)
Clec19aXP_038953831.1 CLECT 49..194 CDD:470576 32/157 (20%)

Return to query results.
Submit another query.