DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11211 and LOC100496055

DIOPT Version :10

Sequence 1:NP_610208.1 Gene:CG11211 / 35545 FlyBaseID:FBgn0033067 Length:176 Species:Drosophila melanogaster
Sequence 2:XP_017951541.1 Gene:LOC100496055 / 100496055 XenbaseID:XB-GENE-29082979 Length:281 Species:Xenopus tropicalis


Alignment Length:160 Identity:36/160 - (22%)
Similarity:65/160 - (40%) Gaps:28/160 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SNINNTDLTF-YQKCNPLLQCNA-YFS----------VAGFAEVNWLEANHVCNRVGAVLATVRN 71
            :.:||.:... :.|.|..:|..| .||          |....|..:.:|...|.:....||:..|
 Frog   134 AKVNNMEAELRHLKLNMAMQKKALVFSKGTSAAEKLYVTNGEEATYEDAKATCTKAEGQLASPMN 198

  Fly    72 EEQHQ----LMLHYVNRKERIFGNRTFWLGATNLVDRSYFWTWMSTGIPVTYAQWSRREPKSDRT 132
            :.:::    |.|.|         |:...||..:..:...| .:::.. .:.::.|...||.:| .
 Frog   199 DAENKAISILSLQY---------NKPVVLGIDDKQNEGTF-KYLNNE-KIVFSNWKPGEPNND-N 251

  Fly   133 GQDACLVLGTDNLWHSEPCQRKHNFICENV 162
            |.:.|:.|.|:.:|:...|..|...:||.|
 Frog   252 GVEDCVELRTNGIWNDMNCNSKRLTVCEFV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11211NP_610208.1 CLECT 49..160 CDD:153057 24/114 (21%)
LOC100496055XP_017951541.1 gly_rich_SclB <38..>123 CDD:468478
Surfac_D-trimer 129..174 CDD:286141 9/39 (23%)
CLECT 167..280 CDD:470576 26/124 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.