DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8343 and Reg4

DIOPT Version :9

Sequence 1:NP_610207.1 Gene:CG8343 / 35544 FlyBaseID:FBgn0040502 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_080604.2 Gene:Reg4 / 67709 MGIID:1914959 Length:157 Species:Mus musculus


Alignment Length:174 Identity:46/174 - (26%)
Similarity:72/174 - (41%) Gaps:33/174 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VCLVFCSAW-SLPE--SDLLPTSPAPGNDTAEEPQLPAFSPFSLRDGRFAIGAFAKV-NWFQAQA 67
            |.|:...:| :.||  ||:|..|.|||             .|..|.  ...|.|.|: ||..|:.
Mouse     6 VRLLLLLSWVAGPEVLSDILRPSCAPG-------------WFYYRS--HCYGYFRKLRNWSHAEL 55

  Fly    68 TCAAY--GYTLVSITSEQDQRSLRNFLFNYARNQQDLLTDPLWTSGTDLASDNNWVWFSKGRAVN 130
            .|.:|  |..|.|:.::::...:..::..|.||.      |:|....|......|.| :.|....
Mouse    56 ECQSYGNGSHLASVLNQKEASVISKYITGYQRNL------PVWIGLHDPQKKQLWQW-TDGSTNL 113

  Fly   131 YRNFQNGLPGYSSDNRHCLGINGINGL--WVNENCSELRYFVCE 172
            ||.:.   |...|:.|||..:|..:..  |....|:..::|:|:
Mouse   114 YRRWN---PRTKSEARHCAEMNPKDKFLTWNKNGCANRQHFLCK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8343NP_610207.1 CLECT 59..173 CDD:153057 30/119 (25%)
Reg4NP_080604.2 CLECT_REG-1_like 29..155 CDD:153064 37/151 (25%)
Carbohydrate-binding. /evidence=ECO:0000250 97..102 1/4 (25%)
Carbohydrate-binding. /evidence=ECO:0000250 134..136 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 46 1.000 Inparanoid score I5484
Isobase 1 0.950 - 0 Normalized mean entropy S6900
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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