DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8343 and Reg4

DIOPT Version :9

Sequence 1:NP_610207.1 Gene:CG8343 / 35544 FlyBaseID:FBgn0040502 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001004096.1 Gene:Reg4 / 445583 RGDID:1303341 Length:157 Species:Rattus norvegicus


Alignment Length:176 Identity:45/176 - (25%)
Similarity:74/176 - (42%) Gaps:33/176 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VCLVFCSAW-SLPE--SDLLPTSPAPGNDTAEEPQLPAFSPFSLRDGRFAIGAFAKV-NWFQAQA 67
            |.|:...:| :.||  ||:|..|.|.|             .|:.|.  ...|.|.|: ||..|:.
  Rat     6 VRLLLLLSWVAGPEVLSDILRPSCASG-------------WFNYRS--HCYGYFRKLRNWSHAEL 55

  Fly    68 TCAAY--GYTLVSITSEQDQRSLRNFLFNYARNQQDLLTDPLWTSGTDLASDNNWVWFSKGRAVN 130
            .|.:|  |..|.|:.:.::...:..::..|.|:.      |:|....|...:.:|.|.. |....
  Rat    56 ECQSYGNGSHLASVLNPKEASVISKYITGYQRSL------PVWIGLHDPQKNASWQWID-GSTNQ 113

  Fly   131 YRNFQNGLPGYSSDNRHCLGINGINGL--WVNENCSELRYFVCEKR 174
            ||.:.   |...|:.|||..:|..:..  |....|::.::|:|:.|
  Rat   114 YRPWS---PRTKSEARHCTEMNPKDKFLTWNKNGCTKRQHFLCKYR 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8343NP_610207.1 CLECT 59..173 CDD:153057 29/118 (25%)
Reg4NP_001004096.1 CLECT_REG-1_like 29..155 CDD:153064 35/150 (23%)
Carbohydrate-binding. /evidence=ECO:0000250 97..101 1/3 (33%)
Carbohydrate-binding. /evidence=ECO:0000250 134..136 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 46 1.000 Inparanoid score I5395
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.970

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