DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8343 and Reg3d

DIOPT Version :9

Sequence 1:NP_610207.1 Gene:CG8343 / 35544 FlyBaseID:FBgn0040502 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_038921.2 Gene:Reg3d / 30053 MGIID:1353426 Length:175 Species:Mus musculus


Alignment Length:186 Identity:36/186 - (19%)
Similarity:70/186 - (37%) Gaps:40/186 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLFLVCLVFCSAWSLPESDLLPTSPAPGNDTAEEPQLPAFSPFSLRDGRFAIGAFAKV------N 61
            |..|:|.:...:|...|......| :|.....:|.|              |.|::..:      .
Mouse    11 SWMLLCCLMSLSWVQGEQSQKKLS-SPRISCPQEAQ--------------AYGSYCYLLILEPQT 60

  Fly    62 WFQAQATCAAY--GYTLVSITSEQDQRSLRNFLFNYARNQQDLLTDP-LWTSGTDLA-----SDN 118
            |..|:..|..:  |:....:|..:       .:|..:..:..|.|.| :|....||:     ::|
Mouse    61 WANAEIHCQKHFSGHLAFLLTYGE-------IIFVSSLVKNSLTTFPYIWIGLHDLSLGSLPNEN 118

  Fly   119 NWVWFSKGRAVNYRNFQNGLPGYSSDNRHCLGINGINGL--WVNENCSELRYFVCE 172
            .|.| |....:.:.|::.. |..|:.:.:|..::..:|.  |.:..|..:..:||:
Mouse   119 GWKW-SSSDPLTFYNWEIP-PSMSAHHGYCAALSQASGYQKWRDYYCDTIFPYVCK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8343NP_610207.1 CLECT 59..173 CDD:153057 25/130 (19%)
Reg3dNP_038921.2 CLECT 40..173 CDD:295302 29/156 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 46 1.000 Inparanoid score I5484
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.060

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