DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8343 and clec-43

DIOPT Version :9

Sequence 1:NP_610207.1 Gene:CG8343 / 35544 FlyBaseID:FBgn0040502 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_493859.2 Gene:clec-43 / 187664 WormBaseID:WBGene00019917 Length:572 Species:Caenorhabditis elegans


Alignment Length:181 Identity:48/181 - (26%)
Similarity:82/181 - (45%) Gaps:33/181 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LFLVCLVFCSAWSLPESDLLPTSPAPGNDTAEEPQLPAFSPFSLRDGRFAIGAF-------AKVN 61
            :|::||:...| :...|.:  ||.||.|     .|.|::|  ...||...:..:       .|..
 Worm     3 IFIICLLHIYA-TFSVSQI--TSRAPYN-----TQTPSYS--GCPDGFIVLNGYTCIQVSTTKKL 57

  Fly    62 WFQAQATCAAY-GYTLVSITSEQDQRSLRNFLFNYARNQQDLLTDPLWTS--GTDLASDNNWVWF 123
            :..|.:.|.:: |..||||.:..|.::|   .|:...      :||.|..  .|:.:|..||..:
 Worm    58 FMDALSDCQSFPGGNLVSIHNSIDNKAL---AFSVTS------SDPKWIGLICTETSSPCNWTDY 113

  Fly   124 SKGRAVNYRNFQNGLPGYSSDNRHCLGINGIN-GLWVN-ENCSELRYFVCE 172
            |...: :|.||..|.|.....|...:.::|.: |.||: :..::|:| :||
 Worm   114 SSDTS-SYSNFVAGNPNLDVGNYVYMLVSGSSAGRWVSADQYTQLKY-ICE 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8343NP_610207.1 CLECT 59..173 CDD:153057 33/119 (28%)
clec-43NP_493859.2 CLECT 36..162 CDD:214480 33/136 (24%)
CLECT 188..320 CDD:214480
CLECT 329..446 CDD:214480
CUB 462..552 CDD:294042
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I7748
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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