DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8343 and clec-24

DIOPT Version :9

Sequence 1:NP_610207.1 Gene:CG8343 / 35544 FlyBaseID:FBgn0040502 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001256729.2 Gene:clec-24 / 186004 WormBaseID:WBGene00009856 Length:396 Species:Caenorhabditis elegans


Alignment Length:183 Identity:50/183 - (27%)
Similarity:78/183 - (42%) Gaps:41/183 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PESDLLPTSP--APGNDTAEEPQLPAFSPFSLRDGRFAIGAFAKVNWFQAQATCAAY---GYTLV 77
            |...||.||.  |.||.|..:    .|:..:.:..:...|..::.:   |..||  |   |.||.
 Worm   122 PTPRLLSTSSTLASGNRTCTD----GFTHINNKCWKLVTGPKSRAD---ADKTC--YDLGGSTLF 177

  Fly    78 SITSEQDQRSLRNFLFNYARNQQDLLTDPLWTSGTDLASDNN---W-VW-FSKGRAVNYRNFQNG 137
            ||.::|:.::|..|:       :|...:.||..   |..|.:   | .| ...|....|.||.:|
 Worm   178 SIRNDQENQALMEFV-------KDQKVENLWAG---LICDRHGPAWCTWDLQSGTTAVYNNFADG 232

  Fly   138 LPGYSSDNRHC--LGINGIN-GLWVNENCSELRYFVCE-------KRCQFDDD 180
            .|  |::::.|  ...||.. |.|.:.:|:|...||||       ..|:::.|
 Worm   233 WP--SNEDKICNYFMTNGTQAGKWASASCTETMSFVCELPATIYDNTCEYNYD 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8343NP_610207.1 CLECT 59..173 CDD:153057 37/131 (28%)
clec-24NP_001256729.2 CLECT 140..268 CDD:214480 37/148 (25%)
CLECT 282..390 CDD:214480 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.