DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8343 and LOC110438686

DIOPT Version :9

Sequence 1:NP_610207.1 Gene:CG8343 / 35544 FlyBaseID:FBgn0040502 Length:182 Species:Drosophila melanogaster
Sequence 2:XP_021327448.1 Gene:LOC110438686 / 110438686 -ID:- Length:87 Species:Danio rerio


Alignment Length:84 Identity:22/84 - (26%)
Similarity:38/84 - (45%) Gaps:9/84 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPAFSPFSLRDGRFAIGAFAKVNWFQAQATCAAYGYTLVSITSEQDQRSLRNFLFNYARNQQDLL 103
            |...||:...|..|:  :....||.:::..|...|..|:.|.||:.||.:.:|:       .:.:
Zfish     4 LTPLSPWCALDEFFS--SMDSKNWSESRQYCRDRGEDLLIIKSEEKQRRVTSFI-------TEKV 59

  Fly   104 TDPLWTSGTDLASDNNWVW 122
            ..|:|...||...:.|.:|
Zfish    60 KMPVWLGLTDAEIEGNMIW 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8343NP_610207.1 CLECT 59..173 CDD:153057 17/64 (27%)
LOC110438686XP_021327448.1 CLECT 16..>86 CDD:321932 18/72 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.