DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8343 and clec4e

DIOPT Version :9

Sequence 1:NP_610207.1 Gene:CG8343 / 35544 FlyBaseID:FBgn0040502 Length:182 Species:Drosophila melanogaster
Sequence 2:XP_004917035.1 Gene:clec4e / 100497788 XenbaseID:XB-GENE-6035508 Length:218 Species:Xenopus tropicalis


Alignment Length:120 Identity:30/120 - (25%)
Similarity:55/120 - (45%) Gaps:13/120 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KVNWFQAQATCAAYGYTLVSITSEQDQRSL--RNFLFNYARNQQDLLTDPLWTSGTDLASDNNWV 121
            |.||.:|::.|...|..||.:.||::|:.|  ::.:.|..|         .|...:|:..:..|.
 Frog   105 KTNWQKARSFCVQEGGDLVVVNSEKEQKFLKEKSGVSNLKR---------FWIGLSDIEEEGTWT 160

  Fly   122 WF-SKGRAVNYRNFQNGLPGYSSDNRHCLGINGINGLWVNENCS-ELRYFVCEKR 174
            |. ....:.:|:.::.|.|.....|..|..:....|.|.:.:|: :..|.:|||:
 Frog   161 WVDGTDYSTSYQFWKKGEPNDHLTNEDCAHLWNPTGEWNDVHCTFQEPYAICEKK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8343NP_610207.1 CLECT 59..173 CDD:153057 28/117 (24%)
clec4eXP_004917035.1 CLECT_DC-SIGN_like 87..214 CDD:153060 28/117 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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