DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6w1 and Cyp4f40

DIOPT Version :10

Sequence 1:NP_610206.1 Gene:Cyp6w1 / 35543 FlyBaseID:FBgn0033065 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001102830.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:523 Species:Rattus norvegicus


Alignment Length:422 Identity:113/422 - (26%)
Similarity:177/422 - (41%) Gaps:85/422 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 LFFARSPGWRELRTKISPVFTSGKIKQMYPLMVKIGKNLQDSAE-------RLGSG--TEVQVKD 174
            |..:.|..|...|:.::|.|....:|.    .|||   ..||..       ||.||  ..:.:.:
  Rat   136 LLVSASDKWSRHRSMLTPAFHFNILKP----YVKI---FNDSTNIMHAKWLRLASGGSAHLDMFE 193

  Fly   175 LCSRFTTDLIATIAFGVEANALQDAKSEFFYHNRAIFSLTLSRGIDFAIIFMIPALASLARVKLF 239
            ..|..|.|.:....|...:|. |:..||:......:.:|.:.|....           |..:.|.
  Rat   194 NISLMTLDTLQKCVFSFNSNC-QEKPSEYIAAILELSALVVKRNEQL-----------LLHMDLL 246

  Fly   240 SRET---TKFIRS-----SVNY-VLKERERTGEKRN--------------DLIDILLALKREAAA 281
            .|.|   .:|.::     ...| |::||.||..|..              |.||:||..|.|.  
  Rat   247 YRLTPDGRRFYKACHLVHDFTYAVIQERRRTLPKHGGDDVIKAKAKSKTLDFIDVLLLSKDED-- 309

  Fly   282 NPGKMSKEVDLDYLVAQAAVFQTAGFETSASTMTMTLYELAKNEALQDRLRQEIVDFFGDED--H 344
                 .||:..:.:.|:|..|...|.:|:||.::..||.|||:...|:|.|||:.:...|.|  .
  Rat   310 -----GKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDSEE 369

  Fly   345 ISYERIQEMPYLSQVVNETLRKYPIVGYIERECSQP---AEGERFTLEPFHNMELPHGMSIYMST 406
            |.::.:.::|:|:..:.|:||.:|.|..:.|.|:|.   .:|.          .:|.|:...::.
  Rat   370 IEWDDLAQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLPDGR----------VIPKGIICIINI 424

  Fly   407 VAVHRDPQYWPDPEKYDPERFNSSNRDNLNMDAYMPFGVGPRNCIGMRLGLLQSKLGLVHILRNH 471
            .|.|.:|..|.|||.|||.||:..|....:..|::||..|||||||....:.:.|:.:...|...
  Rat   425 FATHHNPTVWQDPEVYDPFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRF 489

  Fly   472 RFHTCDKTIKKIEWAPTSPVMASKRDIILRVE 503
            |....||..::            |.::|||.|
  Rat   490 RVLPDDKEPRR------------KPELILRAE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6w1NP_610206.1 CYP6-like 67..498 CDD:410679 109/415 (26%)
Cyp4f40NP_001102830.1 CYP4F 74..515 CDD:410772 113/422 (27%)

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