DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6w1 and Cyp4f18

DIOPT Version :10

Sequence 1:NP_610206.1 Gene:Cyp6w1 / 35543 FlyBaseID:FBgn0033065 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001028858.2 Gene:Cyp4f18 / 290623 RGDID:1305261 Length:524 Species:Rattus norvegicus


Alignment Length:541 Identity:137/541 - (25%)
Similarity:228/541 - (42%) Gaps:90/541 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLLLLLGSLTIVFYIWQRRTLSFWERHGVKYIRPFPVVGCTREFLTAKVPFFEQIQK-------- 58
            |||||:|:..::.||..:....|   ...:.:|.||... ||.:|...:...:..::        
  Rat    20 LLLLLVGASCLLAYILPQVYAVF---ENSRRLRRFPQPP-TRNWLFGHLGLIQSSEEGLLYIQSL 80

  Fly    59 ---FHEAPGFENEPFVGVYMTHRPALVIRDLELIKTVMIKKFQYFNNRVLQTDPHNDALGYKNLF 120
               |.:...:...|:..|.....||. |:.:.|....:..|.:.| .|.|:     ..|| ..|.
  Rat    81 SRTFRDVCCWWVGPWHPVIRIFHPAF-IKPVILAPASVAPKDRVF-YRFLK-----PWLG-DGLL 137

  Fly   121 FARSPGWRELRTKISPVFTSGKIKQMYPLMVKIGKNLQDSA-------ERLGS--GTEVQVKDLC 176
            .:....|...|..::|.|....:|.    .|||   ..||.       :||.|  ...:.:.:..
  Rat   138 LSTGDKWSRHRHMLTPAFHFNILKP----YVKI---FNDSTNIMHAKWQRLASQGSARLDMFEHI 195

  Fly   177 SRFTTDLIATIAFGVEANALQDAKSEFFYHNRAIFSLTLSRGIDFAIIFMIPALASLARVKLFSR 241
            |..|.|.:....|..::|. |:..||:......:.:|...|  ..:::..:.....|.|..:..|
  Rat   196 SLMTLDSLQKCVFSFDSNC-QEKPSEYITAILELSALVARR--HQSLLLYVDLFYHLTRDGMRFR 257

  Fly   242 ETTKFIRSSVNYVLKERERT-----GE---------KRNDLIDILLALKREAAANPGKMSKEVDL 292
            :..:.:....:.|::||.||     |:         |..|.||:||..|.|    .|:...:.|:
  Rat   258 KACRLVHDFTDAVIRERRRTLPDQGGDDALKAKAKAKTLDFIDVLLLSKDE----HGEALSDEDI 318

  Fly   293 DYLVAQAAVFQTAGFETSASTMTMTLYELAKNEALQDRLRQEIVDFFGDE--DHISYERIQEMPY 355
            .   |:|..|...|.:|:||.::..||.|||:...|:|.|||:.:...|.  :.|.::.:.::|:
  Rat   319 R---AEADTFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPF 380

  Fly   356 LSQVVNETLRKYPIVGYIERECSQP---AEGERFTLEPFHNMELPHGMSIYMSTVAVHRDPQYWP 417
            |:..:.|:||.:|....|.|.|:|.   .:|.          .:|.|:...:|....|.:|..||
  Rat   381 LTMCIKESLRLHPPATAISRCCTQDIMLPDGR----------VIPKGVICRISIFGTHHNPAVWP 435

  Fly   418 DPEKYDPERFNSSNRDNLNMDAYMPFGVGPRNCIGMRLGLLQSKLGLVHILRNHRFHTCDKTIKK 482
            |||.|:|.||::.|.:..:..|::||..|||||||....:.:.|:.|...|...|....||..::
  Rat   436 DPEVYNPFRFDADNGEGRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRVLPDDKEPRR 500

  Fly   483 IEWAPTSPVMASKRDIILRVE 503
                        |.::|||.|
  Rat   501 ------------KPELILRAE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6w1NP_610206.1 CYP6-like 67..498 CDD:410679 117/458 (26%)
Cyp4f18NP_001028858.2 CYP4F 74..515 CDD:410772 122/483 (25%)

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