DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6w1 and Cyp4v3

DIOPT Version :10

Sequence 1:NP_610206.1 Gene:Cyp6w1 / 35543 FlyBaseID:FBgn0033065 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001129072.1 Gene:Cyp4v3 / 266761 RGDID:708530 Length:525 Species:Rattus norvegicus


Alignment Length:568 Identity:135/568 - (23%)
Similarity:219/568 - (38%) Gaps:156/568 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLLLLLGSLTIVFYIWQRRTLSFWERHGVKYIRPFPVVGCTREFLTAKVPFFEQIQKFHEAPGFE 66
            :||.:|..|......||:.      |......|.:|:||...........||:||.::.|.  |.
  Rat    29 VLLNILQMLVSYARKWQQM------RPIPSVARAYPLVGHALFMKPNNTEFFQQIIQYTEE--FR 85

  Fly    67 NEPFVGVYMTHRPALVIRDLELIKTVMI------KKFQYFNNRVLQTDPHNDALGYKNLFFARSP 125
            :.|.:.:::...|.:.:...|.::.::.      |.|.|   :.||.        :..|....|.
  Rat    86 HLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFMY---KFLQP--------WLGLGLLTST 139

  Fly   126 G--WRELRTKISPVFTSGKIKQMYPLMVKIGKNLQDSAERLGSGTEVQVKD----------LCSR 178
            |  ||..|..::|.|....::....:|       .:.|..|.:..|..|..          ||: 
  Rat   140 GSKWRARRKMLTPSFHFTILEDFLDVM-------NEQANILVNKLEKHVNQEAFNCFFPITLCA- 196

  Fly   179 FTTDLIATIAFGVEANALQDAKSEF-------------------FYHNRAIFSLTLSRGIDFAII 224
              .|:|...|.|....|..:..||:                   |:.:  ::.|....|.|    
  Rat   197 --LDIICETAMGKNIGAQSNGDSEYVRTVYRMSDMIYRRMKMPWFWFD--LWYLMFKEGRD---- 253

  Fly   225 FMIPALASLARVKLFSRETTKFIRSSVNYVLKER--ERTGE---------------KRNDLIDIL 272
                           .::..|.:.:..|.|:.||  .|..|               ||...:|:|
  Rat   254 ---------------HKKGLKSLHTFTNNVIAERVNARKAEQDCIGAGRGPLPSKTKRKAFLDLL 303

  Fly   273 LALKREAAANPGKMS-----KEVDLDYLVAQAAVFQTAGFETSASTMTMTLYELAKNEALQDRLR 332
            |::..|..   .|:|     :|||         .|...|.:|:|:.:..:||.|..|..:|.::.
  Rat   304 LSVTDEEG---NKLSHEDIREEVD---------TFMFEGHDTTAAAINWSLYLLGSNPEVQRKVD 356

  Fly   333 QEIVDFFGDEDH--ISYERIQEMPYLSQVVNETLRKYPIVGYIERECSQPAEGERFTLEPFHNME 395
            :|:.|.|| ..|  ::.|.::::.||..|:.||||.:|.|....|..|:..|...:        :
  Rat   357 KELDDVFG-RSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVAGY--------K 412

  Fly   396 LPHGMSIYMSTVAVHRDPQYWPDPEKYDPERFNSSNRDNLNMDAYMPFGVGPRNCIGMRLGLLQS 460
            :..|....:...|:||||:|:||||::.||||...|....:..||:||..|||||||.:..:::.
  Rat   413 ISKGTEAVIIPYALHRDPRYFPDPEEFQPERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEE 477

  Fly   461 KLGLVHILRNHRFHTCDKTIKKIEWAPTSPVMASKR-------DIILR 501
            |..|..|||..             |..::    .||       |:|||
  Rat   478 KTILACILREF-------------WIESN----QKREELGLAGDLILR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6w1NP_610206.1 CYP6-like 67..498 CDD:410679 114/498 (23%)
Cyp4v3NP_001129072.1 CYP4V 76..515 CDD:410773 122/515 (24%)

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