DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6w1 and Cyp26a1

DIOPT Version :9

Sequence 1:NP_001286145.1 Gene:Cyp6w1 / 35543 FlyBaseID:FBgn0033065 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus


Alignment Length:525 Identity:106/525 - (20%)
Similarity:207/525 - (39%) Gaps:97/525 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLLLLGSLTIVFYIWQRRTLSFWERHGVKYIRP----FPVVGCTREFLTAKVPFFEQIQKFHEAP 63
            |||.|.:|.    :|....:|..:|.....:.|    ||..|.|.:.:..:..|.:..::.:   
Mouse    18 LLLFLAALK----LWDLYCVSSRDRSCALPLPPGTMGFPFFGETLQMVLQRRKFLQMKRRKY--- 75

  Fly    64 GFENEPFVGVYMTH---RPALVIRDLELIKTVMIKKFQYFNNRVLQTDPHNDA-----LGYKNLF 120
            ||       :|.||   ||.:.:...:.::.:::.:     :|::..  |..|     ||...|.
Mouse    76 GF-------IYKTHLFGRPTVRVMGADNVRRILLGE-----HRLVSV--HWPASVRTILGAGCLS 126

  Fly   121 FARSPGWRELRTKISPVFTSGKIKQMYPLMV-KIGKNLQD--SAERLGSGTEVQVKDLCSRFTTD 182
            .......::.:..|...|:...::...|::. ::...|:.  |....|.....:||.|..|    
Mouse   127 NLHDSSHKQRKKVIMQAFSREALQCYVPVIAEEVSSCLEQWLSCGERGLLVYPEVKRLMFR---- 187

  Fly   183 LIATIAFGVEANALQDAKSE------FFYHNRAIFSLTLSRGIDFAIIFMIPALASLARVKLFSR 241
            :...|..|.|.......:.|      |....|.:|||.:.  :.|:.::......:|...::...
Mouse   188 IAMRILLGCEPGPAGGGEDEQQLVEAFEEMTRNLFSLPID--VPFSGLYRGVKARNLIHARIEEN 250

  Fly   242 ETTKFIRSSVNYVLKERERTGEKRNDLIDILLALKREAAANPGKMSKEVDLDYLVAQAAVFQTAG 306
            ...|..|      |:..|..|..: |.:.:|:       .:..:..:.:|:..|...:......|
Mouse   251 IRAKIRR------LQATEPDGGCK-DALQLLI-------EHSWERGERLDMQALKQSSTELLFGG 301

  Fly   307 FETSASTMTMTLYELAKNEALQDRLRQEI-----VDFFGDEDHISYERIQEMPYLSQVVNETLRK 366
            .||:||..|..:..|.....:..::|:||     :.....::.:..|.::::.|...|:.||||.
Mouse   302 HETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYTGCVIKETLRL 366

  Fly   367 YPIVGYIERECSQPAEGERFTLEPF--HNMELPHGMSIYMSTVAVHRDPQYWPDPEKYDPERFNS 429
            .|.|         |. |.|..|:.|  :..::|.|.::..|....|.....:.:.|:::|:||..
Mouse   367 NPPV---------PG-GFRVALKTFELNGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIV 421

  Fly   430 SNRDNLNMDAYMPFGVGPRNCIGMRLGLLQSKLGLVHILRNHRFHTCD-------KTIKKIEWAP 487
            .:.::.:..:::|||.|.|:|:|.....:..|:..|.:.|:     ||       .|:|      
Mouse   422 PHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARH-----CDWQLLNGPPTMK------ 475

  Fly   488 TSPVM 492
            |||.:
Mouse   476 TSPTV 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6w1NP_001286145.1 p450 34..501 CDD:278495 98/494 (20%)
Cyp26a1NP_031837.2 p450 43..491 CDD:299894 98/496 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.