DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EcR and RORB

DIOPT Version :9

Sequence 1:NP_001163061.1 Gene:EcR / 35540 FlyBaseID:FBgn0000546 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_001351952.1 Gene:RORB / 6096 HGNCID:10259 Length:470 Species:Homo sapiens


Alignment Length:481 Identity:122/481 - (25%)
Similarity:205/481 - (42%) Gaps:104/481 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 KSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRR 314
            |:|.....:::...|.:|||::||.||..:||||||||||||...:|.|.|...|.|.:|...|.
Human     7 KTKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN 71

  Fly   315 KCQECRLKKCLAVGMRPECVVPENQCAMKRREK---KAQKEKDKMTTSPSSQHGGNGSLA----- 371
            :||.|||:||||:||..: .|...:.:.|:|:.   :.||.:.::......|.|...:||     
Human    72 RCQHCRLQKCLALGMSRD-AVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSS 135

  Fly   372 --SGG--------GQDFVKKEILDLMTCE-----------PPQHAT----IPLLPDEILAKCQAR 411
              |.|        ...:....::||...|           |.|...    |..:..|.:  ....
Human   136 SISNGLSNLNNETSGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQEPI--YDLT 198

  Fly   412 NIPSL-TYN-----QLA----------------------------VIYKLIW----YQD--GYEQ 436
            ::|:| ||:     |||                            .:::|.|    |::  .|:.
Human   199 SVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQS 263

  Fly   437 PSEEDLRRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSS 501
            .|.|.|.:          |..:...|       .:|.:|||||.:..|.::.|.|||.|||:...
Human   264 KSREALWQ----------QCAIQITH-------AIQYVVEFAKRITGFMELCQNDQILLLKSGCL 311

  Fly   502 EVMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLHFCRQMFSMKVDNVEYALLTA 566
            ||:::||.|.::..::::.| ..:......:|..|..|.:.:...|.:.:.|:::...|.||.::
Human   312 EVVLVRMCRAFNPLNNTVLF-EGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSS 375

  Fly   567 IVIFS-DRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTELRTLGNQNAE 630
            .|:.| ||..|.:.:.|:.:|......|:..|...|..|..    .|||::.:..:..:.|.:.|
Human   376 AVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDET----LAKLIAKIPTITAVCNLHGE 436

  Fly   631 MCFSLK-----LKNRKLPKFLEEIWD 651
            .....|     :.|...|...:|:::
Human   437 KLQVFKQSHPEIVNTLFPPLYKELFN 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EcRNP_001163061.1 NR_DBD_EcR 261..351 CDD:143535 41/92 (45%)
NR_LBD_EcR 420..652 CDD:132736 60/272 (22%)
RORBNP_001351952.1 NR_DBD_ROR 14..108 CDD:143526 41/94 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..127 4/22 (18%)
NR_LBD_ROR_like 221..461 CDD:132737 57/261 (22%)
AF-2 456..461 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157578
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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