Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005257609.1 | Gene: | RARA / 5914 | HGNCID: | 9864 | Length: | 478 | Species: | Homo sapiens |
Alignment Length: | 531 | Identity: | 139/531 - (26%) |
---|---|---|---|
Similarity: | 226/531 - (42%) | Gaps: | 129/531 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 201 GVGGGGVGGLGMQHTPRS---------DSVNSISSGRDDLSPSSSLNGYSANESCDAKKSKKGPA 256
Fly 257 PRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRL 321
Fly 322 KKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDL 386
Fly 387 MTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDE 451
Fly 452 NESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSS 516
Fly 517 DSIFFANNRSYTRDSYKMAGMADNIEDLLHFCRQMFSMKVDNVEYALLTAI-VIFSDRPGLEKAQ 580
Fly 581 LVEAIQSYYIDTLRIYILNR-----HCGDSMSLVFYAKLLSILTELRTLGNQNAEMCFSLKLKNR 640
Fly 641 KLPKFLEEIWDVHAIPPSVQSHLQITQEENERLERAERM-----RASVGGAITAGIDCDSASTSA 700
Fly 701 AAAAAQHQPQP 711 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 41/89 (46%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 63/237 (27%) | ||
RARA | XP_005257609.1 | NR_DBD_RAR | 98..182 | CDD:143522 | 41/86 (48%) |
NR_LBD_RAR | 202..432 | CDD:132735 | 73/295 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165157579 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |