DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EcR and PPARD

DIOPT Version :9

Sequence 1:NP_001163061.1 Gene:EcR / 35540 FlyBaseID:FBgn0000546 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_001165289.1 Gene:PPARD / 5467 HGNCID:9235 Length:441 Species:Homo sapiens


Alignment Length:459 Identity:131/459 - (28%)
Similarity:203/459 - (44%) Gaps:72/459 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 GMQHTPRSDSVNSISSGRDDLSPSSSLNGYSANESCDAKKSKKGPAPRVQEELCLVCGDRASGYH 275
            |.||...|.|...:|...   ||.|.|:  .....||      |.:.......|.||||:|||:|
Human    32 GPQHALPSSSYTDLSRSS---SPPSLLD--QLQMGCD------GASCGSLNMECRVCGDKASGFH 85

  Fly   276 YNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQC 340
            |....||||||||||::.....| .|..|:|::....|.|||.||.:||||:||....:      
Human    86 YGVHACEGCKGFFRRTIRMKLEY-EKCERSCKIQKKNRNKCQYCRFQKCLALGMSHNAI------ 143

  Fly   341 AMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPPQHATIPLLPDEIL 405
               |..:..:.||.|:..         |..|:.|.|  ...::.||....  :|.....|.:..:
Human   144 ---RFGRMPEAEKRKLVA---------GLTANEGSQ--YNPQVADLKAFS--KHIYNAYLKNFNM 192

  Fly   406 AKCQARNI--------PSLTYNQLAVIYK----LIWYQDGYEQPSEEDLRRIMSQPDENESQTDV 458
            .|.:||:|        .....:.:..:::    |:|.|            .:...|...|....|
Human   193 TKKKARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQ------------LVNGLPPYKEISVHV 245

  Fly   459 SFR-HITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSIFFA 522
            .:| ..|  |:.||:.:.||||.:|:|:.:...||:||||....|.:...:|...  :.|.:..|
Human   246 FYRCQCT--TVETVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIV--NKDGLLVA 306

  Fly   523 NNRSY-TRDSYK--MAGMADNIEDLLHFCRQMFSMKVDNVEYAL-LTAIVIFSDRPGLEKAQLVE 583
            |...: ||:..:  ....:|.||....|..:..::::|:.:.|| :.||::..|||||.....||
Human   307 NGSGFVTREFLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVE 371

  Fly   584 AIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTELRTLGNQNAEMCFSLKLKNRK--LPKFL 646
            |||...:..|..::...| .|:..|  :.|||..:.:||.|..::|:|...:|....:  |...|
Human   372 AIQDTILRALEFHLQANH-PDAQYL--FPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLL 433

  Fly   647 EEIW 650
            :||:
Human   434 QEIY 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EcRNP_001163061.1 NR_DBD_EcR 261..351 CDD:143535 37/89 (42%)
NR_LBD_EcR 420..652 CDD:132736 66/242 (27%)
PPARDNP_001165289.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 8/24 (33%)
NR_DBD_Ppar 73..156 CDD:143523 39/92 (42%)
NR_LBD_PPAR 173..440 CDD:132730 74/286 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157577
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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