Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001002574.1 | Gene: | nr1h4 / 436847 | ZFINID: | ZDB-GENE-040718-313 | Length: | 483 | Species: | Danio rerio |
Alignment Length: | 477 | Identity: | 169/477 - (35%) |
---|---|---|---|
Similarity: | 240/477 - (50%) | Gaps: | 87/477 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 212 MQHTPRSDSVNSIS-----------SGRDDLSPSS-------SLNGYSAN---ESCD-----AKK 250
Fly 251 SK--------KGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACE 307
Fly 308 MDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLAS 372
Fly 373 GGGQDFVKKEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQP 437
Fly 438 SEEDLRRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSE 502
Fly 503 VMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAGMADN-IEDLLHFCRQMFSMKVDNVEYALLTA 566
Fly 567 IVIFS-DRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTELRTLGNQNAE 630
Fly 631 MCFSLKLKNRKLPKFLEEIWDV 652 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 64/89 (72%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 72/233 (31%) | ||
nr1h4 | NP_001002574.1 | NR_DBD_FXR | 134..217 | CDD:143520 | 61/82 (74%) |
NR_LBD_Fxr | 258..478 | CDD:132734 | 69/231 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 131 | 1.000 | Domainoid score | I5123 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1137281at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm25332 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.020 |