Protein Alignment EcR and nhr-52

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_506899.1
• Gene: nhr-52 / 3565623
• WormBaseID: WBGene00003642
• Length: 338
• Species: Caenorhabditis elegans
• Alignment Length: 426
• Identity: 97/426 - (22%)
• Similarity: 147/426 - (34%)
• Gaps: 134/426 - (31%)

  Fly   264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVG 328
            ||||...||..::.||:|..||.||.|:....|.:.||:.:.|.....:..|||.||.||||.:|
 Worm     3 CLVCCSYASSRNFGALSCSACKMFFTRATKNYAKFTCKYDKKCFESFTILPKCQFCRFKKCLEIG 67

  Fly   329 MRPECVVPENQCAMKRREKKAQ-------KEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDL 386
            ||             ..|.|.|       .::|.:...        |:||...|..:  ...|:.
 Worm    68 MR-------------FSEPKQQLFNLNNSVDQDLIILL--------GNLAVKDGVHY--SNFLNF 109

  Fly   387 MTCEPPQHATIPLLPDEILA-----KCQARNIPSLT----YNQLAVIYKLIWYQDGYEQPSEEDL 442
            .:.|.|.       .|:|||     |...|.:...|    :..|...||:..:.|       .|.
 Worm   110 YSLEDPS-------MDDILADRSRMKLMKRTLEIKTKSHEWTFLGSYYKIAQFLD-------FDF 160

  Fly   443 RRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLR 507
            .:.||..|..     :.|.:                              .||.....|..|...
 Worm   161 VKTMSLADRK-----ILFSY------------------------------NTLRMGSLSRSMRTY 190

  Fly   508 MARR---YDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLH--FCR---QMFSMKVDNVEYALL 564
            :.:|   ...|.|.:|          |..:.|:.|...::::  .|:   ::..:|:...||.||
 Worm   191 LDKRDCLMTPSGDDLF----------SPAVRGLFDKTPEIINRILCQVVGRLMEIKITYEEYLLL 245

  Fly   565 TAIVI--------FSD--RPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILT 619
            ..||.        .||  |..|.|.|.:.|...:....|:    |:|...:.    :..:|||.
 Worm   246 IMIVFCNPSISHELSDSARETLSKYQNMYASFLFRFCQLK----NQHKAPTR----FNDILSIC- 301

  Fly   620 ELRTLGNQNAE------MCFSLKLKNRKLPKFLEEI 649
               .:.|:|.|      |.|...:...|..|.:.:|
 Worm   302 ---NVNNKNVEDYCFVHMMFQCMVPEFKFKKLVNDI 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	33/93 (35%)
		NR_LBD_EcR	420..652	CDD:132736	49/254 (19%)
nhr-52	NP_506899.1	ZnF_C4	2..69	CDD:197701	28/65 (43%)
		HOLI	158..303	CDD:214658	37/201 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165610
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840