Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506899.1 | Gene: | nhr-52 / 3565623 | WormBaseID: | WBGene00003642 | Length: | 338 | Species: | Caenorhabditis elegans |
Alignment Length: | 426 | Identity: | 97/426 - (22%) |
---|---|---|---|
Similarity: | 147/426 - (34%) | Gaps: | 134/426 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVG 328
Fly 329 MRPECVVPENQCAMKRREKKAQ-------KEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDL 386
Fly 387 MTCEPPQHATIPLLPDEILA-----KCQARNIPSLT----YNQLAVIYKLIWYQDGYEQPSEEDL 442
Fly 443 RRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLR 507
Fly 508 MARR---YDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLH--FCR---QMFSMKVDNVEYALL 564
Fly 565 TAIVI--------FSD--RPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILT 619
Fly 620 ELRTLGNQNAE------MCFSLKLKNRKLPKFLEEI 649 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 33/93 (35%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 49/254 (19%) | ||
nhr-52 | NP_506899.1 | ZnF_C4 | 2..69 | CDD:197701 | 28/65 (43%) |
HOLI | 158..303 | CDD:214658 | 37/201 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165610 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |