Protein Alignment EcR and ppardb

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_571543.1
• Gene: ppardb / 30754
• ZFINID: ZDB-GENE-000112-47
• Length: 517
• Species: Danio rerio
• Alignment Length: 487
• Identity: 134/487 - (27%)
• Similarity: 214/487 - (43%)
• Gaps: 77/487 - (15%)

  Fly   188 LIGVVGGGGGVGLGVGGGGVGGLGMQHTPRSDSVNSISSG--RDDLS-PSSSLNGYSANESCDAK 249
            :.|:....|..|...|....|....|.:|..:|...:::|  .|.|. ||.||       |...:
Zfish    80 ITGLEASPGSKGSWGGNQQNGDRTPQESPPPNSETPVTAGAFSDPLQVPSLSL-------SDQLR 137

  Fly   250 KSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVY-CCKFGRACEMDMYMR 313
            ..::.|........|.:|||:|||:||....||||||||||::.....| .|:  |||::....|
Zfish   138 LGREDPNKLGLNVECRICGDKASGFHYGVHACEGCKGFFRRTIRMKLEYERCE--RACKVQKKSR 200

  Fly   314 RKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTT------SPSSQHGGN-GSLA 371
            .|||.||.:||||:||..:.:         |..:..:.||.|:..      :|.|..|.: .:||
Zfish   201 NKCQYCRFQKCLALGMSHDAI---------RYGRMPEAEKKKLVAGLLAGENPQSSSGADLKTLA 256

  Fly   372 SGGGQDFV------KKEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWY 430
            ......::      ||:...::|.:  ...|.|.:..::.:..||.|             .|:|.
Zfish   257 KHVNTAYLRNLNMTKKKARSILTGK--TSCTAPFVIHDMDSLWQAEN-------------GLVWN 306

  Fly   431 QDGYEQPSEEDLRRIMSQPDENESQTDVSFR-HITEITILTVQLIVEFAKGLPAFTKIPQEDQIT 494
            |             :...|...|....|.:| ..|  |:.||:.:.||||.:|.|..:...||:|
Zfish   307 Q-------------LNGAPLNKEIGVHVFYRCQCT--TVETVRELTEFAKNIPGFVDLFLNDQVT 356

  Fly   495 LLKACSSEVMMLRMARRYDHSSDSIFFANNRSY-TRDSYK--MAGMADNIEDLLHFCRQMFSMKV 556
            |||....|.:...:....  :.|.:..||.:.: ||:..:  ....::.:|....|..:..::::
Zfish   357 LLKYGVHEAIFAMLPSLM--NKDGLLVANGKGFVTREFLRSLRKPFSEIMEPKFEFAVKFNALEL 419

  Fly   557 DNVEYAL-LTAIVIFSDRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTE 620
            |:.:.|| :.||::..|||||...:.||.||...:..|..: |..|..||..|  :.|||..:.:
Zfish   420 DDSDLALFVAAIILCGDRPGLMNVKQVEQIQDGILQALDQH-LQVHHPDSSHL--FPKLLQKMAD 481

  Fly   621 LRTLGNQNAEMCFSLKL--KNRKLPKFLEEIW 650
            ||.|..:||::...:|.  ....|...|:||:
Zfish   482 LRQLVTENAQLVQMIKKTESETSLHPLLQEIY 513

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	37/90 (41%)
		NR_LBD_EcR	420..652	CDD:132736	64/238 (27%)
ppardb	NP_571543.1	NR_DBD_Ppar	151..234	CDD:143523	39/93 (42%)
		NR_LBD_PPAR	250..516	CDD:132730	74/299 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170593370
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.840