Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017455067.1 | Gene: | Rarb / 24706 | RGDID: | 3535 | Length: | 455 | Species: | Rattus norvegicus |
Alignment Length: | 579 | Identity: | 155/579 - (26%) |
---|---|---|---|
Similarity: | 238/579 - (41%) | Gaps: | 172/579 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 172 IGGMGI--LH--HANGTPNGLIGVVGGGGGVGLGVGGGGVGGLGMQHTPRSDSVNSISSGRDDL- 231
Fly 232 -SPSSSLNGYSANESCDAKKSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKS 295
Fly 296 AVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSP 360
Fly 361 SSQHGGNGSLASGGGQDFVKKEILDLMTCEPPQHATIPLLPD--EILAKCQARNIPSLTYNQLAV 423
Fly 424 IYKLIWYQDGYEQPSEEDLRRIMSQPDENESQTDVS-FRHITEITILTVQLIVEFAKGLPAFTKI 487
Fly 488 PQEDQITLLKACSSEVMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLHFCRQMF 552
Fly 553 SMKVDNVEYALLTAI-VIFSDRPGLEKAQLVEAIQSYYIDTLRIYILNR-----HCGDSMSLVFY 611
Fly 612 AKLLSILTELRTLGNQNAEMCFSLKLKNRKLPKFLEEIWDVHAIPPSVQSHLQITQEENERLERA 676
Fly 677 ERMRASVGGAITAGIDCDSASTSAAAAAAQHQPQPQPQP-QPSSLTQNDSQHQTQPQLQ 734 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 40/89 (45%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 66/238 (28%) | ||
Rarb | XP_017455067.1 | NR_DBD_RAR | 82..166 | CDD:143522 | 41/90 (46%) |
NR_LBD_RAR | 186..416 | CDD:132735 | 77/281 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166351535 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |