Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001272446.1 | Gene: | Nr1h2 / 22260 | MGIID: | 1352463 | Length: | 446 | Species: | Mus musculus |
Alignment Length: | 473 | Identity: | 168/473 - (35%) |
---|---|---|---|
Similarity: | 250/473 - (52%) | Gaps: | 65/473 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 207 VGGLGMQHTPRSDSVNSISSGRDDLSPSSSLNGYSA--------NESCDAKKSKKGPAPR-VQEE 262
Fly 263 LCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAV--YCCKFGRACEMDMYMRRKCQECRLKKCL 325
Fly 326 AVGMRPECVVPENQCAMKRREKKAQKE----KDKMTTS---PSSQHGGNGSLASGGGQDFVKKEI 383
Fly 384 LDLMTCEPPQHATIPLLPDEILA---KCQARNI---PSLTYNQLAVIYKLIWYQDGYEQPSEEDL 442
Fly 443 RRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLR 507
Fly 508 MARRYDHSSDSIFFANNRSYTRDSYKMAGM-ADNIEDLLHFCRQMFSMKVDNVEYALLTAIVIFS 571
Fly 572 -DRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTELRTLGNQNAEMCFSL 635
Fly 636 KLKNRKLPKFLEEIWDVH 653 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 52/91 (57%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 83/233 (36%) | ||
Nr1h2 | NP_001272446.1 | Transactivation AF-1, required for ligand-independent transactivation function. /evidence=ECO:0000250|UniProtKB:P55055 | 1..76 | 16/63 (25%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..69 | 13/56 (23%) | |||
NR_DBD_like | 58..154 | CDD:383039 | 54/95 (57%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 159..201 | 9/45 (20%) | |||
Transactivation AF-2, required for ligand-dependent transactivation function, mediates interaction with CCAR2. /evidence=ECO:0000250|UniProtKB:P55055 | 205..446 | 93/276 (34%) | |||
NR_LBD_LXR | 209..444 | CDD:132752 | 89/269 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167847954 | |
Domainoid | 1 | 1.000 | 130 | 1.000 | Domainoid score | I5184 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAC4 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H21397 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1137281at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005880 | |
OrthoInspector | 1 | 1.000 | - | - | otm43527 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4552 |
SonicParanoid | 1 | 1.000 | - | - | X4275 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.880 |