Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001276689.1 | Gene: | Rarb / 218772 | MGIID: | 97857 | Length: | 482 | Species: | Mus musculus |
Alignment Length: | 603 | Identity: | 162/603 - (26%) |
---|---|---|---|
Similarity: | 239/603 - (39%) | Gaps: | 173/603 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 143 HGLINSTTPSTPTTPLHLQQNLGGAGGGGIGGMGILHHANGTPNGLIGVVGGGGGVGLGVGGGGV 207
Fly 208 GGLGMQHTPRSDSVNSISSGRDDL--SPSSSLNGYSANESCDAKKSKKGPAPRVQEELCLVCGDR 270
Fly 271 ASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVV 335
Fly 336 PENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPPQHATIPLL 400
Fly 401 PD--EILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQTDVS-FRH 462
Fly 463 ITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSIFFANNRSY 527
Fly 528 TRDSYKMAGMADNIEDLLHFCRQMFSMKVDNVEYALLTAI-VIFSDRPGLEKAQLVEAIQSYYID 591
Fly 592 TLRIYILNR-----HCGDSMSLVFYAKLLSILTELRTLGNQNAEMCFSLKLKNRKLPKFLEEIWD 651
Fly 652 VHAIPPSVQSHLQITQEENERLERAERMRASVGGAITAGIDCDSASTSAAAAAAQHQPQPQPQPQ 716
Fly 717 PSSLTQNDSQHQTQPQLQ 734 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 40/89 (45%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 66/238 (28%) | ||
Rarb | NP_001276689.1 | Modulating | 1..114 | 23/120 (19%) | |
NR_DBD_RAR | 109..193 | CDD:143522 | 41/90 (46%) | ||
Hinge | 181..209 | 9/58 (16%) | |||
NR_LBD_RAR | 213..443 | CDD:132735 | 76/278 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 443..482 | 13/61 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167847956 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |