Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001157172.1 | Gene: | Nr1h4 / 20186 | MGIID: | 1352464 | Length: | 488 | Species: | Mus musculus |
Alignment Length: | 445 | Identity: | 157/445 - (35%) |
---|---|---|---|
Similarity: | 221/445 - (49%) | Gaps: | 66/445 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 225 SSGRDDLSPSSSLNGYSANESCDAKKSKKGP------APRVQ-EELCLVCGDRASGYHYNALTCE 282
Fly 283 GCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPEC----VVPENQCAMK 343
Fly 344 RREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPPQHATIPLLPDEILAKC 408
Fly 409 QARNIPSLTYNQLAVIYKLIWYQDGY--EQPSEEDLRRIMSQPDENESQTDVSFRHITEITILTV 471
Fly 472 QLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAG 536
Fly 537 MADN-IEDLLHFCRQMFSMKVDNVEYALLTAIVIFS-DRPGLEKAQLVEAIQSYYIDTLRIYILN 599
Fly 600 RHCG--DSMSLVFYAKLLSILTELRTLGNQNAEMCFSLKLKNRKLPKFLEEIWDV 652 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 64/93 (69%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 74/237 (31%) | ||
Nr1h4 | NP_001157172.1 | NR_DBD_FXR | 135..222 | CDD:143520 | 61/86 (71%) |
NR_LBD_Fxr | 264..483 | CDD:132734 | 71/234 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 133 | 1.000 | Domainoid score | I5038 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1137281at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.020 |