Protein Alignment EcR and nhr-82

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_493090.1
• Gene: nhr-82 / 191729
• WormBaseID: WBGene00003672
• Length: 326
• Species: Caenorhabditis elegans
• Alignment Length: 399
• Identity: 77/399 - (19%)
• Similarity: 137/399 - (34%)
• Gaps: 132/399 - (33%)

  Fly   247 DAKKSKKGPAPRVQEELCLVCG--DRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMD 309
            :|....:||.|        ||.  || :..|:..:.|..|..|||||..:.  |.|...:.| :.
 Worm     2 EATSQNRGPCP--------VCSSMDR-TRRHFGIIACTACAAFFRRSFGQQ--YLCNAEKKC-II 54

  Fly   310 MYMRR-KCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASG 373
            |:.|: .|:.||...|:..|||.:.|             :.||...:...|..:|...|
 Worm    55 MHDRKFFCRACRYSSCVKAGMRRDLV-------------RKQKNNPRHPASLETQLPRN------ 100

  Fly   374 GGQDFVKKEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPS 438
                                      || |:|:|..  .|.::.:::|     |.:|.||.|.
 Worm   101 --------------------------LP-EMLSKFS--KILNIHHDEL-----LKYYVDGVED-- 129

  Fly   439 EEDLRRIMSQPDENESQTDVSFRHITE---ITILTVQLIVEFAKGLPAFTKIPQEDQITLLK--- 497
                  .::|...:.....:..:.|.|   |:.:...::::.....|....:.|:|...|||
 Worm   130 ------TIAQKQNDNVMNALQIKSIVELHKISEMENNVVLDDCLNCPGVDVLEQDDVEVLLKYFK 188

  Fly   498 ---------ACSSEVMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLHFCR---- 549
                     ..||...:.:...:...:|:.:|                      |.||..|
 Worm   189 FVNIWVYSALASSSTCLEQFPEQTGDNSNQLF----------------------DFLHQVRSTLG 231

  Fly   550 -QMFSMKVDNVEYALLTAIVIFSDRPGLEKAQLVEAIQSYYIDT-LRIYILNRHCGDSMSLVFYA 612
             .:..:.::..|||...:..|::             ::.:...| ::|.....|.|.:.:|..|.
 Worm   232 SSLVRLNLNIFEYAAFKSFCIWN-------------LKFFGTSTAMKIVAEEHHIGITWALRKYY 283

  Fly   613 KLLSILTEL 621
            |..:.:||:
 Worm   284 KESTNMTEV 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	25/92 (27%)
		NR_LBD_EcR	420..652	CDD:132736	37/223 (17%)
nhr-82	NP_493090.1	ZnF_C4	10..78	CDD:197701	26/79 (33%)
		HOLI	155..311	CDD:214658	27/173 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165544
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840